Phytophthora infestans: PITG_11158
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Entry
PITG_11158 CDS
T01333
Name
(RefSeq) pre-mRNA-splicing factor SYF1-like protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
pif
Phytophthora infestans
Pathway
pif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PITG_11158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_11158
03041 Spliceosome [BR:
pif03041
]
PITG_11158
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PITG_11158
Spliceosome [BR:
pif03041
]
Complex B
Other components
Prp19-related factors
PITG_11158
Complex C
PITG_11158
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
Suf
TPR_14
Mad3_BUB1_I
TPR_8
NRDE-2
TPR_15
TPR_12
ARM_TT21
RPN7
TAF1_subA
DUF5575_C
Motif
Other DBs
NCBI-GeneID:
9476320
NCBI-ProteinID:
XP_002901926
UniProt:
D0NGB5
LinkDB
All DBs
AA seq
887 aa
AA seq
DB search
MSSLFVPGYSQVTLYSTSRSMMAMLPPTTSDLTMVDGVLFEYEDEATRQPFAVQTWTSYL
RALADAPLTDRCRIYERSLQSLPRSYKLWKLYLNDVYDTQVRGQRVDSPLFTQLVALYER
ALAQLSTMPRLWLDYLNVLHEMRVVTARRHVFDRALRALPITQHHRIWTPYLAFVKQIGV
PRTAVRVYKRYLMLEPSKRGEFVDYLVSIEHYEEASLQLVQLIESTQEKPSSTDRTQHSM
WMQLCDMVSQHPTRVAKSLDVEAILRSGMTRFSDEVGRLWCSLATYFVRLGMFESARDVY
EEGIRTVVTVRDFSMIFDAYVKYIEAMLTAEMDLAAGADDEDDEEEDEVDHQAQVDRLLK
VYEDVAERRPLLLNSVLLRQNPHNVREWEKRIELVKADLQKVIRTYAEAVKTVDPVKSGG
RLPTLWIRFAKFYDEHGDLNNARAIFKKAVDVEYRNPQELAAVYCEWAELELRHENFDQA
LEIVRGACAIPATRTIRLRKRQSLTAKDNVHLSVKLWTLRLDLEESLGDLESTRAAYDEV
FELRIITPQMVLNFAAYLEESKYFEESFRVYERGLALFPKFPHAGELWQTYLTKFVKRFA
GTKMERTRDLFEQAIRAAPAKSARGFYEKYAEFEEQHGMLRNVMTIYERAADAVPDDDKL
SIYEKYIKKAQKFFGVAKVRDVYQRGIAQLPDKCVPNLCLKFAQMETKLGEFDRARAIYA
HASQFCDPRQHEKAFWKVWHEFEVSHGSEHTFLEMLRIKRSVVAQYSQVNYVASEIAPQD
GETSKIAGMVAASTPAAAGDAMAALEAQLDVPSADEGDAAKKRKGETMESENERNVRQKQ
IVEVANEEEIDLDDEDDDAEEEAGGDVDIEEREVPSTLLGGGIKASE
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctctattcgtgcctggctactcgcaggttacgctctactcgacatcccgcagc
atgatggcgatgctgcctccgactacctcggacctgaccatggttgacggcgtgttattc
gagtatgaagacgaggctacacgccagccattcgccgttcagacatggacctcatatctg
cgcgcgctggccgacgccccgctcaccgaccgatgccgaatctacgagcgtagtctccaa
tctctcccgcgcagctacaagctctggaaactctatctgaacgacgtgtacgacacacaa
gtgcgaggacagcgcgttgactccccactgttcacacaactagtggctctgtacgaacgc
gcattggcgcagctatccacaatgcccagactgtggctcgactacctcaatgtactacat
gagatgcgcgtagtgactgcgcgtcgtcacgtgttcgacagagcgctccgagcgctgcca
attacccaacaccaccgcatctggacgccgtatctagccttcgtcaagcagatcggcgta
ccccgcacagctgtgcgtgtgtacaaacgatatttgatgctggaaccgtcaaagagaggg
gaatttgtcgactatttagtgtcaatagagcactacgaagaggccagcttgcagctggtg
caactaatcgagtcgacgcaggagaagccatcaagcacagaccgcacacagcacagtatg
tggatgcagctctgcgatatggtgtcgcaacacccaacgcgtgtggcaaagtcgctggat
gtggaagcgattctacgaagtggcatgactcgctttagtgacgaggtgggacgactctgg
tgctcactggcgacgtattttgtgcggctgggaatgttcgagtcggcacgagacgtgtat
gaagagggtattcgcacggtggtgacggtgcgcgacttcagcatgatcttcgacgcgtac
gttaagtatatcgaagcgatgctgacagcagagatggacctcgcagctggagccgatgac
gaggacgacgaagaagaagacgaagtggaccatcaagcacaagtcgatcggctgttaaag
gtgtacgaggatgtggccgagcgacgtccgttgctgctcaactcggttcttttacgtcag
aacccgcacaacgtacgtgagtgggagaaacgaattgagctggtcaaggcggacctgcag
aaggtcattcgaacctacgctgaagccgtgaaaacagtggaccctgtcaaatccggtggc
cgcttgccgacgctttggatccgattcgccaagttctacgacgagcatggagatttgaac
aacgcgcgtgcgatcttcaagaaggctgtggatgtggaataccgtaaccctcaggagctc
gctgcggtgtactgcgagtgggcggaattggaacttcgtcacgagaatttcgaccaagcg
ctggagattgtacgtggagcttgtgccatcccagcgacacgtacgattcgacttcgtaag
cgacagtcattgacagccaaagacaacgtgcacctgagtgtaaaactctggactttacgt
ctggatctcgaagagagtctgggagatctcgagtccactcgtgctgcctatgacgaagtg
ttcgagctgagaatcatcacgccacagatggtgcttaactttgcggcctatctggaagag
agcaagtacttcgaggagtctttccgtgtgtacgaacgcggtctggcactcttccctaag
ttcccgcatgcaggagaactgtggcagacgtacctgacgaagtttgtgaagcgatttgct
ggcaccaagatggagcgaactcgcgatctgttcgagcaggcgattcgtgctgctccagcg
aaatctgcacgtggattctacgagaaatacgccgagtttgaagaacagcacggcatgcta
cgcaacgtcatgacaatttatgagcgcgcggccgacgctgttccagacgacgacaagttg
tccatttacgaaaagtacattaagaaggcgcagaagttctttggcgtggccaaagtacgg
gacgtgtatcagcgaggtattgcccagctgcccgataagtgtgtcccgaatctgtgtctc
aagtttgcgcagatggagacgaaactgggcgaatttgatcgcgctcgagccatttacgct
cacgcgtctcaattctgtgacccacgtcagcatgaaaaggcattctggaaggtgtggcat
gagttcgaggtctctcacggctccgagcatacgttcctcgaaatgctgcgcatcaagcgc
tcggtggtggctcaatactcccaggtgaactacgtggcgtctgaaatcgctcctcaggac
ggagagacgtcgaagattgcagggatggtggcagcgtcaacgcctgcagctgctggagat
gccatggctgctttggaggcgcaacttgatgtgccgtcagctgacgaaggcgacgctgcg
aagaagcggaaaggagagacgatggagtctgaaaatgaacggaatgtacgtcagaagcag
attgtggaggtggcgaatgaagaagagatcgatttggacgacgaagacgacgacgcagag
gaagaagcgggaggagatgtcgatatcgaagagcgcgaggtgccgtcaactctactgggt
ggaggcatcaaggcgtcagaatga
DBGET
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