Phytophthora infestans: PITG_11296
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Entry
PITG_11296 CDS
T01333
Name
(RefSeq) DNA mismatch repair protein Msh3, putative
KO
K08736
DNA mismatch repair protein MSH3
Organism
pif
Phytophthora infestans
Pathway
pif03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PITG_11296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_11296
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PITG_11296
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_II
MutS_IV
TrbI_Ftype
Motif
Other DBs
NCBI-GeneID:
9476448
NCBI-ProteinID:
XP_002902054
UniProt:
D0NGP3
LinkDB
All DBs
AA seq
888 aa
AA seq
DB search
MEKQVVRLRKAYPNTLLLFECGYRMRIFGKDAENAAAVLDIRAQQHKNFLETSVPVHRTL
FHARRLVHAGFKVGVVKQMDSVAMRAVNKAPGAQRKPLERCVTDIYTRATIPELENCGDD
SEEEDTIARFIACIVEETIHSKPFFSQSMHEVDEETKRSPVFSEDVRIGIFMHDIHTGES
KFDEFEDDGKRQRLQRTLETLDPVEFVLPAGRLSAYTEQIVDTFVAISDETSVIDDRKAT
VRMERIPNEAFDYSAAKETFTRAFHEAGSEYTTTVAYPNLPKMCVCCFGGMWQYLSSLGT
AQTLIAPTYTSLSSPTSTFAGQFHLPTEAYRDLDLFVNSTTKRGVGSLLSILNHTKTSAG
ARKLRDWIRSPLVDVQEIAARQKTIESLAFPSGSLSTESIPHRLAYEELTTTILPRSKHL
LKYLQQVHLGKATPSQAVGALQILQDLEDHIHGLKATFASITDVDQTTVLDRLLEGYPTL
QARLTPLLDEVDVKYAQPSLARKYRAFTRELETLAREYDAVLVTCRSALRDPLLEYSTFR
GGSLSDIHHLIEVKRSDLHVVPQDWLVVNSTTQLVRFHPKQIIQLHIQEEFVKQQKEQLV
RALWRQFVSEVDAQVYVTGMACVDILANLDALCSLATVAQSYPNYTKPQFVDDDVVTLEI
NDGRHPIIEMLLEGSSYISNSVLISSTAGSLMVVSGPNMGGKTSLLRMCALVVILAQIGS
FVPASSVRLSVFDGVYTLMHRSTSKYSSCAQELTTLGSISRNATKNSLVLIDEIGFGMAA
QYAEAVAVGQMTYLTDTAGCLVVFATHLTAATEKLLARLGDKCQTRQLEYHFYDQEEADA
HTEIQDVVTFHYVLKDGVASDSVAIETARRAGIASAILARATELIGSL
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaggttgtgaggctgcgaaaggcgtacccaaatactctgttgttgttcgaa
tgtggctatcgtatgcgcatttttggcaaagatgccgagaacgctgctgcggtgttggac
attcgagcccagcagcataaaaacttcctggagacgtcggtgccggtgcatcggacgctg
tttcatgctcgaagattagtccacgcggggtttaaagttggcgttgtaaagcagatggac
tcggtcgccatgcgagcagttaacaaagcgccaggtgcacaacgcaaacctctggagaga
tgtgtgacagacatttatactcgagcgacgattccagagctagaaaattgtggagatgac
agcgaagaggaggacacaattgcaaggtttattgcctgtattgtggaagaaacgatacat
tcgaagcccttcttttcgcagtcaatgcacgaggtcgatgaagaaacgaaaaggagtccg
gtcttctccgaagatgtgcgcattggcattttcatgcacgacattcacacaggcgaatcc
aaatttgacgaattcgaagatgatggcaagcggcaacgcctacagcgcacactggaaacc
ctcgacccagtggagtttgtgttaccagcaggtcgactcagtgcgtacactgagcaaata
gtggatacctttgtggcaatttcagacgagacttcagttatagacgatcgaaaagccact
gtccgcatggaacggatacctaacgaggcttttgattactcggctgctaaggagacgttc
acgcgcgctttccatgaagctggatcggagtacactactacagttgcgtacccaaatctg
ccgaaaatgtgcgtctgctgctttggaggaatgtggcaatatctatcttcgctgggtact
gcgcagacgctcattgcaccgacctatacaagtttatccagcccaacatcgacttttgca
gggcaatttcaccttccaacggaagcctatcgagacctcgacctcttcgtcaactcgaca
accaagcgcggcgtgggctccctcctgtcgattctaaaccacaccaaaaccagtgctggt
gcaaggaagcttcgtgactggattcgctctcctttagtcgacgtacaagagatcgcggca
cgtcaaaagacgatcgagagcttagcgttcccttctgggtcgttatctacggaatcaatc
ccacaccgactggcgtatgaggagttgacgacgaccattttacctcgtagcaagcatctg
ttgaagtatctacagcaggttcatctcggcaaggcgacacccagtcaagccgtcggagcg
ctccagattctacaggatctggaagatcatatccacggattaaaagcaacgttcgcttcc
ataacagacgtagatcaaactacagttctagatcggcttctagaaggctatccgacactg
caagctcgtctcacgccgcttctagacgaggtggatgtcaaatatgcacaaccctcgcta
gcacgaaagtatcgagcgttcacgcgagagctcgagacactcgcgcgtgagtacgatgcc
gtgctggtgacgtgcagaagtgctctcagagaccctttgttagagtactctacgttcaga
ggaggctcgttgagtgacatccaccatctgatcgaagttaagcgttcagatcttcacgtt
gtgcctcaagactggctggtagtgaattccactacgcaactcgtccggttccacccgaaa
cagatcatccagcttcatattcaggaagagtttgtcaaacaacagaaagagcagctggtt
cgagctttatggagacagtttgtgagtgaggtggacgcccaagtgtacgtgactgggatg
gcctgtgtggacattctagcgaacctggacgccttgtgttcgctggctacagtggctcag
agttacccaaactatacgaagcctcagtttgtggacgatgacgtcgtcacattagagatc
aacgatgggcgtcatccgattattgaaatgttgctggaaggatcgtcgtatattagcaat
tccgtgttgatatcgagtacggccgggtctttgatggttgtgtcgggtccgaatatgggg
ggcaagaccagtctgcttcgcatgtgtgcgctcgtggtgattctcgctcaaatcgggtca
tttgttccagcgtcaagtgtgcggttgtctgtgttcgacggggtctacacgctcatgcat
cgcagtacaagcaaatactcgtcgtgcgcccaagaattgacaacgctggggtccatctcg
cgtaacgctacgaagaactcactcgttcttatagacgagattggctttggaatggctgct
cagtatgcagaagctgtggcggtggggcagatgacgtacctaactgacacagccggatgc
ctcgtggtgtttgccacgcatcttactgcagcgacggagaaactgctagctcgtttgggc
gataaatgccagacaagacagttggagtatcacttttacgaccaggaagaggccgacgcg
cacacggagattcaagacgtggtgacgttccattacgtgcttaaagacggggtagcgagt
gacagtgtcgctatcgagacggccagacgtgccggtattgcgtctgctatactagcgcgg
gctacagagttgataggtagtctataa
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