Phytophthora infestans: PITG_11972
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Entry
PITG_11972 CDS
T01333
Name
(RefSeq) pre-mRNA-splicing factor 38A, putative
KO
K12849
pre-mRNA-splicing factor 38A
Organism
pif
Phytophthora infestans
Pathway
pif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PITG_11972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pif03041
]
PITG_11972
Spliceosome [BR:
pif03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
PITG_11972
Complex C
U4/U6.U5 tri-SnRNP related factors
PITG_11972
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
9470957
NCBI-ProteinID:
XP_002901430
UniProt:
D0NHN2
LinkDB
All DBs
AA seq
199 aa
AA seq
DB search
MNATDPGAQSVHGVNPQTLVEKIMRNRIYASIYWKEQCFGLTAETLVDKAVELQEFGGTF
GGNQQPTHLLCLLLKMLQLQPELEVVKQFIENEDYKYVTVLGAVYLRLVGKPLEVYTLLE
PLLSDYRKIRKRNVIGWEITHVDEIADALLNEEYYIDLALPRLVERELLEKSDGLAPRRS
PLEDELDADSDSSSSSEKE
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgacggaccctggcgcgcagagcgtgcacggcgtgaacccacagacgctagtg
gagaagatcatgcgcaaccgcatctacgccagcatatactggaaggagcagtgctttggg
ctcaccgcagagacgttggtagacaaagctgtcgagctccaagagtttggaggcacgttt
ggaggcaaccagcagcccacgcacttgctgtgccttctgcttaaaatgctgcagctgcag
cctgaactggaagtcgtgaagcaattcatcgagaacgaggactacaagtacgtgacggtg
ttgggggctgtatacttgcgcttggtgggcaaacctctggaggtttatacgctgctggag
ccgctgctgagcgactaccgaaagattcgcaagcgcaacgtcatcggctgggagatcaca
cacgtagacgagattgcagacgctctacttaatgaagaatactatatcgacttggctctt
cctagattggtggagagagagttgctggagaagagcgatggattggcgccgagaaggagt
ccgctcgaagacgaactcgacgctgatagcgatagtagcagtagtagtgagaaggagtag
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