Phytophthora infestans: PITG_12165
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Entry
PITG_12165 CDS
T01333
Name
(RefSeq) DEAD/DEAH box RNA helicase, putative
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pif03009
]
PITG_12165
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PITG_12165
Ribosome biogenesis [BR:
pif03009
]
Eukaryotic type
Pre-60S particles
Helicases
PITG_12165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
CDC45
AAA_22
CENP-B_dimeris
Sorting_nexin
Motif
Other DBs
NCBI-GeneID:
9473174
NCBI-ProteinID:
XP_002900785
UniProt:
D0NJ74
LinkDB
All DBs
AA seq
763 aa
AA seq
DB search
MSGLSVVPYTLAPATGAGSKPSKKRKKRSNSGANSADVDASSSMTNAGWEKVDIQDMQLE
GFQDGCAFELEELTDYRVENTEDGGKMLNRGGKAKKEQELVEIVALKDVNLPKWNKFKLH
PLLMQSLQTCGFSAPTRIQERTLLPALVDNRDVVGAAPTGSGKTLAFGLPILSQLLHERE
QPGYIKDCKALILTPTRELAIQIQQHLEKMVRNREIGVVTLVGGMAVQKQKRILTYRPEI
VIGTPGRLWDIIETNHEHMQDLATSLRFLVVDEADRMLQPGSYSELEKIFEVLRRKNKSA
ASELTNLSDSEEEESDEADNEDSDEDDGEDIDMSKFASGSKVMMLDDVLKMQRKQQQKSA
TAKETDKSVKTKVEVAASRHVRQTFLFSATLTIPEGGRFQKTKTKKYRNALSVLERVMKR
VGLRGKPAVVDLSIAESDIGIPGAKPLMSEEAERKLKKQQQNVALSLPAGLELCQHEVTE
STRDSFLYFFLTQYPGRTIIFLNAIHQVRKLSGLLTLLNLPVFALHAEMQQRQRLKKLDG
FRSHSKGILVATDVAARGLDIPSVDYVVHYHIARSTEVFVHRSGRTARANKDGLSISLVS
PTDAKYHTQICKMLQRPTGLSDFPFDHRYLEAIDERLRLAKSINEQENAAGKLKSEATWF
QQMAAAADLDLDEDLLFELGAKQRNQDGKKKKTANQSVQSLRAQLSRLLAAPLRPVGSAR
KFRQLHKELGSQITGDGEYRARDANEDLASKGKKSYKRFRRRK
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgagcggactgtcggtggtgccctacactctagcgccggcgacgggagcagggtcgaag
ccgtccaagaagcggaagaaacgctcgaactcaggcgctaacagtgcagatgtggatgcg
agctcgtcgatgaccaacgccggctgggaaaaggtggacatccaggatatgcagcttgag
gggttccaggacggatgcgccttcgagctggaagaactcaccgactaccgcgtagagaat
acggaagacggtggtaagatgctgaatcgcggtggcaaggctaagaaggagcaggagctg
gttgagattgtggcgttgaaagacgtgaacctccctaagtggaacaaattcaagctgcat
cctctgcttatgcagtcactgcagacatgcggcttcagtgctccgacacgcattcaggaa
cgcacgttgctaccagcgcttgttgacaaccgagatgttgtaggtgccgcaccgacaggg
tccggtaagacgttggcctttggacttcccatcttgagccaattgctgcatgaacgcgag
caaccagggtacattaaggactgcaaggcgctgattttgactccaacacgcgaactggct
atccagatccagcaacatcttgaaaaaatggtccgtaatcgcgagatcggcgtggtgacg
ttggtgggtggtatggctgtgcagaagcagaagagaattctcacttacagacctgagatc
gtcatcggtacacctggtcgtctttgggatatcattgagaccaaccacgaacacatgcag
gatctggcaacgtcgctacgcttcctggtggtggatgaggccgatcgtatgctgcagcca
ggatcgtattcggaattggagaagatctttgaggtgttgcgtcgcaagaacaaatctgca
gcttctgaactgacgaatctttcagacagtgaagaagaggaaagcgatgaagcagacaac
gaggatagtgacgaagatgatggcgaggatatcgatatgtcgaagtttgcaagtggatcg
aaggtcatgatgcttgatgatgtactcaagatgcaacgtaagcagcaacagaagtctgcg
actgccaaggagactgacaagtccgtgaagacgaaggtcgaggtagctgcttcgcgtcat
gtgcgccagacgtttctgttctccgctacgctgacgattccagaaggtggtcgcttccag
aagactaaaaccaagaagtaccgtaacgcgttgagtgttctggagcgagtcatgaagcgt
gtgggtctacgtggcaagcctgcagttgtggaccttagtatcgcagagtctgacatcggt
atcccgggagcaaagccactaatgtcggaagaagcggagcgtaaactgaagaaacaacag
cagaatgtggccttgtctctgcctgcgggtctcgagctctgtcagcacgaagtgacggag
tctacacgcgacagtttcctgtacttcttcctcacacagtatccgggtcgtaccatcatt
ttcttgaacgctatccatcaagttcgcaagctttcgggtctgctgactctattgaacctc
cccgtgtttgctctacacgccgagatgcagcaacgtcaacgtttgaagaagttggatggc
ttccgttcacactcgaaggggattctggtggcgactgacgttgcagcacgtggtctggat
atccctagcgtggactacgtcgtgcactaccatattgctcgttctaccgaggtgttcgtg
catcgaagtggtcgtacggctcgtgcgaacaaagatgggctgagtatctcgctggtgtcg
cctactgatgccaagtaccacacacagatctgtaagatgttgcaacgacctactggactg
tcggacttcccgttcgatcatcggtatctggaagcaattgacgagcgtttgcgtcttgcc
aagagcatcaacgagcaggagaacgcggcgggtaaactcaagtcggaggcgacgtggttc
cagcaaatggctgccgctgcagacttggacttggacgaggatttgttgttcgagttggga
gccaagcagcgaaatcaggacggcaagaagaagaagacagccaatcagtcggtgcagtcg
ctacgtgctcagctgagtcgtctgcttgctgctcctctgcgtcctgtgggctcggctcgt
aagttccgacagctacacaaggaactaggatctcagatcactggagacggcgagtaccgt
gctcgtgatgctaacgaagacctggcatcgaaggggaagaagtcgtacaagcgcttccgc
cgaaggaaatag
DBGET
integrated database retrieval system
