KEGG   Phytophthora infestans: PITG_12694
Entry
PITG_12694        CDS       T01333                                 
Name
(RefSeq) protein transport protein SEC13
  KO
K14004  protein transport protein SEC13
Organism
pif  Phytophthora infestans
Pathway
pif03013  Nucleocytoplasmic transport
pif04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    PITG_12694
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    PITG_12694
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pif03019]
    PITG_12694
   04131 Membrane trafficking [BR:pif04131]
    PITG_12694
Messenger RNA biogenesis [BR:pif03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     PITG_12694
Membrane trafficking [BR:pif04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    PITG_12694
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    PITG_12694
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    PITG_12694
SSDB
Motif
Pfam: WD40 Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR55 Beta-prop_RIG_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_Vps41 Beta-prop_TEP1_C Beta-prop_EIPR1 Beta-prop_WDR19_1st WD40_Gbeta Beta-prop_WDR90_POC16_2nd WD40_RFWD3 eIF2A
Other DBs
NCBI-GeneID: 9478042
NCBI-ProteinID: XP_002900105
UniProt: D0NKZ1
LinkDB
AA seq 309 aa
MSAPILSIDTQHEDMIHDAQLDYYGKRLATCSSDRTIKVYDVAGDVQNNEQILTGHEGPV
WQVSWAHPKFGVLLAACSYDGKVIIYREQSLNQWTQAYVHAFHDSSVNSIAWAPHEYGLA
LACASADGTVSVLSYSPEGWSVSHFKDSALGCNAVSWAPFNSVGSQGPSGPIRRVMTASC
DKTIKIWSLPEGETEWTKQELSSVPAHSDWVRDVAWAPSTGLPVNLIASCSEDKHVYIWS
QTAEDSSWKRELLHTFDAPVWRVSWSVTGNVLAVSSGDHKVTLWKETLDKKWIQISSVDE
AGAIHNGNE
NT seq 930 nt   +upstreamnt  +downstreamnt
atgagtgcccccatcctctctatcgacacgcagcacgaggacatgatccacgacgcacag
ctggactactacggcaagcgtctggccacttgctcctctgaccgcactattaaggtttac
gacgtcgcgggcgacgtgcagaacaacgagcagatcttgacgggccacgagggccctgtg
tggcaagtgtcgtgggcgcaccccaagtttggcgtgctgctggcggcctgctcctatgac
ggcaaggtcatcatttaccgcgaacagagcttgaaccagtggacccaggcctacgtccac
gccttccacgattcctcagtcaacagcatcgcctgggcaccccacgaatacggacttgca
ctcgcctgcgcctctgctgacggaactgtatccgtgctcagctactcgcctgagggctgg
agcgtgagccactttaaggacagcgcactgggttgcaacgctgtcagctgggctcctttt
aactcagtgggctcgcagggtccgtccggtcccatccgccgagtaatgacggcttcgtgt
gacaagacgatcaagatctggagcctgccggagggtgagacggagtggaccaagcaggag
ctcagctctgttcccgcacacagtgactgggtgcgtgacgttgcgtgggctccgagcacg
ggactgccagtgaacctcattgccagttgctcagaagacaagcacgtgtacatctggtcg
cagactgccgaagacagttcctggaagcgcgagctgctgcacacgttcgacgctcctgtg
tggcgtgtgagctggtctgtcactggcaacgtgctggctgtgtcttcgggcgaccacaag
gtcacgctctggaaggagactctcgacaagaagtggattcaaatttcgtcggtggacgag
gctggtgccattcacaacggcaacgagtag

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