Phytophthora infestans: PITG_12797
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Entry
PITG_12797 CDS
T01333
Name
(RefSeq) regulator of nonsense transcripts 2, putative
KO
K14327
regulator of nonsense transcripts 2
Organism
pif
Phytophthora infestans
Pathway
pif03013
Nucleocytoplasmic transport
pif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PITG_12797
03015 mRNA surveillance pathway
PITG_12797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_12797
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
PITG_12797
mRNA cycle factors
P-body specific factors
PITG_12797
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Nop14
HSL_N
RR_TM4-6
Motif
Other DBs
NCBI-GeneID:
9478122
NCBI-ProteinID:
XP_002900183
UniProt:
D0NL69
LinkDB
All DBs
AA seq
1155 aa
AA seq
DB search
MARDDEDEDVQAQALSQLRELQRQREVRSALRSANSVTNVAAVREQLATLKLKSDIKRSS
AFVKKLRVLSEANADSLLRDAAELNLTRYVSECVAALADAPLKAADLPAAVKVASLLHQR
YEDFAPGMVRALVSSFEASYTSEDKGKMLRRRLLLRLLCELYLAGVFDDVQVIAHIIQRV
ARRESPGPKKSRGNMSILGSSTGSSQQLEVPLLVSFAKSVGVDFLGTTVVPQNVQEECRS
CYLEAYDMICKFYLAQHATFLKLDARNEKEEANRGEVTEEHVQELKNAKLLFEKLQTSVN
SLADALDRDVPPLPVEEKDDGSGNGSILVWEGGDGTGRELSRDGPFDDEATRSFYEDLPD
LLELVPAVVLGLTEADVAELKKKKETAAAEEEETETEIEEDEEELATTEDDGKDETEDTT
LDDLEETDEEESKEVKVEVSDTSAETARTPSTSYHHQLDAFFASLEDLVNRDRCDKAAVE
FCYRNSKATRSRLVKTLYAVPRTHLELLAHYARLVATLQSVLKEDIGGELVSLLVGEFHG
LIKRRNQFRLESKIKNIRFLAELVKFRLCPPATGFRCLQRCFQDFQGHNVHVATTFLENC
GRFLYCSKHTHARTVNCLSIMMKLKAAKHLDPQLETLVENAYYMCKPPERVERQVKQYDP
LYLYLIRLLYQDLNGSNVNKVVKTLRRFPWQERGTCGLVLKALLKVTKGKVLQMKWICDV
VKGLVRYHDQVLVLLVDDVLEHVRYGLEVNDYRDHQRSLGYVKLLGELYNCGLVSMNVVV
ETLYLLINHSHDLLTLPQYSGDKLSAAQLLEMKKKFLLVPDMRYDPRVPSDVDGPTEVFR
VRLVSALIETCNGSGGSPSLPGLSHPTERGISRPRLGRFMVFFQRYLLSKTEVPVETEFV
VFDLFEMLAGSLRDHFKKFDTWEDVDQAVQEILRGDMEEAERRLSKKNAALLMATNGLES
ELLIIHDRVQKSEEDDEFEKAFKSMMHGSTDTRKPAARVNVDKMAIPTVVKSSAALAPAG
SRGLLSLDANGSPDGVVFRMLRRGNKGKVEARPLVVPEASSLAQHSHRQENAGKKEQSEL
KRLVLQNMERDDFMSDGPPIDGISSFGPPPRANVNFSSQGAGQQVNENRMGFGGGSEWNN
AEFGLRRGKGYRGTK
NT seq
3468 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcgacgacgaggacgaggacgtgcaggctcaagctctgtcgcagcttcgcgag
ctccaacgccagcgtgaagtgcgttcagccctgcgctcagccaatagcgtgaccaacgtt
gcggccgtgcgcgagcagctggccacactcaagctaaagtcggacatcaaacgctcttcc
gcctttgtcaagaagctgcgcgtgctcagcgaggccaacgcagactcgctactacgcgat
gcagcggaacttaatctgaccagatacgtgagcgagtgcgtggcagcgctggcggacgct
ccactcaaggctgcagatctgcctgccgccgtcaaagtggcgtcgctcttgcatcagcga
tacgaagactttgcacctgggatggtgcgtgcactagtgagcagcttcgaggcctcgtac
acgtcggaagacaagggcaagatgctccgacgccgacttctcctacgtttactatgcgaa
ctttacctggccggagtgtttgacgacgtccaggtgatagctcacatcatccagcgagtg
gcgagacgtgagtcacctggacccaagaagagtcgaggtaatatgtccatcttaggctct
agcacaggctcctcgcagcaactggaggtcccgcttctcgttagcttcgccaagtcggta
ggtgtggactttctcggcacgaccgtcgtgcctcagaacgtgcaggaagagtgtcggagc
tgctatctggaggcgtacgacatgatctgcaagttttatctggcacaacacgcgacgttc
ttgaagttggacgccaggaacgagaaggaagaggccaatcgcggggaagtgacggaggag
catgtgcaggagctcaagaacgccaaattactgttcgagaagctgcagacgagcgtcaac
tccctggccgacgctctggaccgagacgtgccgccgctcccggtggaggagaaagacgac
gggtcaggaaacggcagtattctcgtctgggaaggcggcgacggtactggtcgggaactg
agcagagatgggccttttgatgacgaagctacacgctccttttacgaggatctgccggac
ttattggagctggttcctgcggttgtgttaggcctgacagaagctgatgtggccgagctg
aagaagaagaaagagactgccgcagctgaagaagaagagacggagactgagatcgaagaa
gatgaagaagaactggcgaccacagaggacgacggcaaagacgagacagaagacacgaca
ctggacgatttagaggagactgacgaggaggagagtaaagaagttaaggtggaagtcagc
gatacgagcgcagagaccgccagaacaccgtctaccagctaccaccatcagctggacgcc
ttcttcgcgtctctggaggatttggtgaatcgagaccgatgcgataaggcagcagtggag
ttttgctaccgcaactccaaggccactcgaagtcgtctagtcaagacgctgtatgcagtg
ccacgcacgcacttggagctgctagcgcactatgctcgtctggtcgccacgctgcagagt
gtgctgaaagaagacattggcggcgagctggtgagtctgctagtgggcgagttccacggc
cttatcaagcgtcggaaccagtttcgcctcgagtcgaagatcaagaacatccgcttttta
gcagaactcgtcaagttccggctctgtcctcctgccacgggctttcgctgtctgcagcgc
tgcttccaggacttccagggccacaacgtgcatgtggccacgacgttcctcgagaactgc
gggcgcttcctgtactgctccaagcacacgcacgctcgcaccgtcaactgcctgagtatc
atgatgaagctcaaagcagccaagcacttggacccgcagctggagacgctggtggagaac
gcctactacatgtgcaagccgccggagcgagtggagcgccaggtgaagcagtacgatcct
ctgtatctgtatctgattcggctgctgtaccaggatctgaacggctcgaacgtcaacaag
gtcgtcaagacgctgcgtcgcttcccgtggcaagagcgcggcacgtgtggcctggttctc
aaggcgttgctcaaggtcacgaagggcaaagtgctgcagatgaagtggatctgcgacgtg
gtcaagggcttggtgcggtaccacgaccaagtgctggtcttgctggtggacgacgtgttg
gagcacgttcggtacggcctggaggtgaatgactaccgagaccatcaacgcagtctcggg
tatgtgaagctcttaggagaactttacaactgtggcctggtgagcatgaacgtggtggtg
gagacgctgtacctgctgatcaaccactcgcacgacttgctgacgttgccgcagtacagt
ggcgacaagctgtcggctgcgcagctgctggagatgaagaagaagttcctcctggtgcca
gatatgcgctacgaccctcgtgtgcccagcgacgtggacgggccgacggaagtgttccgc
gttcgtctggttagtgcgttgattgagacttgcaatggcagtggggggagtccgagtctc
cctggccttagccacccaaccgagagaggcatctcgcgtccgcgtctgggtcgctttatg
gtctttttccagcgctatctcttgtccaagacggaggtgccggtggagaccgagttcgtc
gtgttcgacctcttcgagatgctcgcgggtagtctgcgagaccatttcaagaagtttgat
acgtgggaagacgtggaccaggccgtacaggagattcttcgcggggacatggaggaggcg
gagcggcgcttgtcgaagaagaatgcagcgctgttgatggctacaaacggactcgagagt
gagctcctgatcatccacgaccgcgtccagaagagcgaagaggacgacgagttcgagaag
gccttcaagtccatgatgcacggctcgactgacacgcgcaaaccggcggcacgggtcaac
gtggacaagatggcgattcctaccgttgtcaagagctcggctgctctggcccctgcaggt
tctcgtggactgctctctctggacgcgaatggatcgcctgatggcgtcgtgttccgaatg
ttacgtcgagggaacaaaggcaaagtggaggcgcgtccgttggtcgttccggaagcttcg
tcgctggcccagcacagtcatcggcaggaaaatgctggcaagaaggagcagtcggagctc
aagcgcttagtgctgcagaacatggagcgtgacgactttatgagtgacggccctccgata
gatgggatctctagcttcggccccccaccgcgtgctaacgtcaacttcagtagccaagga
gcaggccaacaggtcaacgagaaccgcatggggttcggaggtggtagcgagtggaacaac
gcagagttcggacttcgtcgaggcaaaggatatcgcggcaccaagtag
DBGET
integrated database retrieval system
