Phytophthora infestans: PITG_12871
Help
Entry
PITG_12871 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K14552
NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
pif
Phytophthora infestans
Pathway
pif03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PITG_12871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pif03009
]
PITG_12871
Ribosome biogenesis [BR:
pif03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
PITG_12871
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR75_1st
Beta-prop_WDR75_2nd
Beta-prop_EML
Beta-prop_EML_2
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
WD40_WDHD1_1st
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WDR90_beta-prop_4th
EIF3I
Beta-prop_VPS8
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
WD_LRWD1
NBCH_WD40
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
9478181
NCBI-ProteinID:
XP_002900240
UniProt:
D0NLC6
LinkDB
All DBs
AA seq
823 aa
AA seq
DB search
MTDELELLTPPPQAAPSSGRVGLSAATLVYSSDGRYVFQRQAHVVRVLHSQSGRVLHECV
RADNKSAVRALALHPHNALQLLAAYDDGYIIVWDFVEHKPLAELDAKAPVLWMASSRTSA
SQLLLVVQTDANTWSLIEFSLKKKKRGRVLFQNSKKLFQAAALQSYTTPQGDGEQAVPGD
FLVVAAGDKLVTLWLHHQSGAKDSGNRVYSMQKLNHLRDVTCVAVSPTQREFSIGDQIGQ
IYRYQQQGETASKMHWHSHAVHCIQYSSDGQFLLSGGEECVLVSWQLETGRRAYLPRLPA
SVEVIAPRQDGGVYAVGLADSVLFQYNPVTREQEWEARGFVACRSTSRSRNRVLQTLLLS
ERNQVTRTEDEVLPTLRASHSCFSSRGGDLVTLHAPTTAKHGDEQALRFWTRRVDGSFFV
NTAIDAPHGRAQVTSMTYSPSQTEDSLVTADEQGDFKVWQKTATETGGASWHCQAVVRFR
DEPVTAVGFARDGSLLAVAYGNKLTLWDVATHSLRRVIPSADGQTITQIVFPGINSPYVV
VVTDSQVQVWSLLSLSLWWRYTVPKGAVVAEESLYERFLVWLPVDDSKKKTLVLVFDAQT
PVPTCVRVVDVGCKVWSAGFHPGTGDIVLLDNKTGVWRLDGPKARSQDARRRKQAHVAAV
AARDAAKDGEQEAKALSAIYNAASGGRLAEKKSSHMHAGPHGVAANGSASSSLFDAPAHV
LPSMTALYRSFMDTMLPKPHQVAEADETVKNANEPSTSQKKKNKRRKKQQQQQATTDPTV
NESGEQRKRMKLQVEKELANTELQQQTYSKLLETFRNSKARRA
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atgacggacgagctggagctactgacgccgccgccgcaggccgcgccatcctcagggcgc
gtgggtctctccgccgctacgctcgtgtactcgtccgacggtcgctacgtgttccagcgt
caggcgcacgtggtgcgcgtgctgcactcgcaaagcggtcgcgtccttcacgaatgtgtt
cgcgctgacaacaagagcgcggtgcgcgcgctggcactgcacccacacaacgcgctgcag
ttgctagctgcatacgacgacggctacattatcgtgtgggatttcgtggagcacaagccg
ctcgcggagctggatgccaaggcgcccgtactgtggatggcgtccagccgcacgagcgcg
tcgcagcttcttctggtcgtccagaccgacgcaaacacctggagcctaatagagttcagc
ctaaagaaaaagaaacgcggtcgcgtgttgtttcagaatagcaaaaagctgttccaggct
gctgcgctgcagagctacacgacgccacaaggtgacggcgaacaggctgttccgggagac
tttttagtagtggcggccggcgacaagctggtcactttatggctccaccaccaatcggga
gctaaagactcgggcaaccgcgtgtactcaatgcagaagctcaaccaccttcgtgacgtc
acgtgcgtcgccgtcagcccgacgcaacgggagttctctatcggcgaccagattggccag
atctaccgataccagcagcaaggagaaacagcgtccaagatgcactggcactcgcacgcc
gtgcactgcatccagtactcgagcgacggccagttcctgctgtcgggcggtgaagagtgc
gtgctggtgtcctggcaactggaaacaggtcgtcgcgcttatctgccgcgtctcccggcg
tccgtggaggtcattgcgcctcgtcaagacggtggcgtgtacgccgtgggcctggcggac
agtgtactcttccaatacaacccggtgacgcgcgaacaggagtgggaggcgcgtggcttt
gtcgcgtgccgttctacgagccgttcgcggaaccgtgtactgcagacgttgctgctatca
gagcgaaaccaggttacgcgcacagaggacgaggtgttgcctacgcttcgtgcgtcacac
tcgtgcttcagctcccgtggcggcgacttggtgacgcttcatgcgccgacgacggcgaaa
cacggcgacgaacaggctctgcgcttctggacgcgtcgtgtggacggctcgttctttgtc
aacacggcaattgacgcgcctcacggccgcgcacaggtaacgagcatgacgtactcgcct
tcccagaccgaggacagtctggtgacggcggatgaacagggagatttcaaggtgtggcag
aagacggcgacggagacaggaggcgcgtcgtggcactgtcaggcggttgtgcgcttccgt
gacgagccggtcactgccgtgggctttgcgcgcgatggatcgttgcttgctgtggcgtac
ggtaacaaactcacgctctgggacgtcgctacgcactcgttgcggcgtgtgatcccgtcc
gcggacggccagacaattactcagattgttttccccggtatcaactcgccgtacgtcgtg
gttgtgacagacagtcaggtacaggtgtggagtttgttgtcgctgtcgctgtggtggcgc
tacacggtacccaagggtgccgtcgtggccgaggaatctctgtacgaacgcttcttggtc
tggttgccagtggacgactcgaagaagaaaacgctggtgctggttttcgacgcccagacg
cctgtaccgacctgcgtgcgtgttgtagacgttggctgtaaggtgtggagcgctggtttc
caccccggcactggagacattgtgcttcttgacaacaagaccggagtatggagactggac
ggacctaaggccagatcgcaggacgcccggcgccggaaacaggcccacgttgctgccgtc
gctgcgcgcgacgccgccaaggacggcgaacaggaggccaaggctctcagcgccatctac
aacgccgccagtggcggtcgtcttgcagagaaaaagtccagccacatgcatgcggggcct
catggcgtggcggccaacggctctgcgtctagcagcctgttcgacgcgccggctcacgtc
ctgccgtccatgacggcactgtaccggtcgttcatggacaccatgctgccgaagccccac
caggttgctgaagccgacgagactgttaagaacgcgaacgaaccgtcgacgtcgcagaag
aagaagaacaagcgacgtaagaagcagcaacagcaacaagccacgacggatccgaccgtg
aatgaaagtggagagcaacgcaagcgcatgaagctccaggtagagaaagaactggctaac
acggagttgcagcagcagacatactccaaactgctcgagacatttcgcaacagtaaggcg
cgtcgggcgtag
DBGET
integrated database retrieval system