KEGG   Phytophthora infestans: PITG_12871
Entry
PITG_12871        CDS       T01333                                 
Name
(RefSeq) hypothetical protein
  KO
K14552  NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17)
Organism
pif  Phytophthora infestans
Pathway
pif03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    PITG_12871
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pif03009]
    PITG_12871
Ribosome biogenesis [BR:pif03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    PITG_12871
SSDB
Motif
Pfam: Beta-prop_WDR75_1st Beta-prop_WDR75_2nd Beta-prop_EML Beta-prop_EML_2 WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_IFT140_1st ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_TEP1_C Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th EIF3I Beta-prop_VPS8 Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st WD_LRWD1 NBCH_WD40 Beta-prop_Vps41
Other DBs
NCBI-GeneID: 9478181
NCBI-ProteinID: XP_002900240
UniProt: D0NLC6
LinkDB
AA seq 823 aa
MTDELELLTPPPQAAPSSGRVGLSAATLVYSSDGRYVFQRQAHVVRVLHSQSGRVLHECV
RADNKSAVRALALHPHNALQLLAAYDDGYIIVWDFVEHKPLAELDAKAPVLWMASSRTSA
SQLLLVVQTDANTWSLIEFSLKKKKRGRVLFQNSKKLFQAAALQSYTTPQGDGEQAVPGD
FLVVAAGDKLVTLWLHHQSGAKDSGNRVYSMQKLNHLRDVTCVAVSPTQREFSIGDQIGQ
IYRYQQQGETASKMHWHSHAVHCIQYSSDGQFLLSGGEECVLVSWQLETGRRAYLPRLPA
SVEVIAPRQDGGVYAVGLADSVLFQYNPVTREQEWEARGFVACRSTSRSRNRVLQTLLLS
ERNQVTRTEDEVLPTLRASHSCFSSRGGDLVTLHAPTTAKHGDEQALRFWTRRVDGSFFV
NTAIDAPHGRAQVTSMTYSPSQTEDSLVTADEQGDFKVWQKTATETGGASWHCQAVVRFR
DEPVTAVGFARDGSLLAVAYGNKLTLWDVATHSLRRVIPSADGQTITQIVFPGINSPYVV
VVTDSQVQVWSLLSLSLWWRYTVPKGAVVAEESLYERFLVWLPVDDSKKKTLVLVFDAQT
PVPTCVRVVDVGCKVWSAGFHPGTGDIVLLDNKTGVWRLDGPKARSQDARRRKQAHVAAV
AARDAAKDGEQEAKALSAIYNAASGGRLAEKKSSHMHAGPHGVAANGSASSSLFDAPAHV
LPSMTALYRSFMDTMLPKPHQVAEADETVKNANEPSTSQKKKNKRRKKQQQQQATTDPTV
NESGEQRKRMKLQVEKELANTELQQQTYSKLLETFRNSKARRA
NT seq 2472 nt   +upstreamnt  +downstreamnt
atgacggacgagctggagctactgacgccgccgccgcaggccgcgccatcctcagggcgc
gtgggtctctccgccgctacgctcgtgtactcgtccgacggtcgctacgtgttccagcgt
caggcgcacgtggtgcgcgtgctgcactcgcaaagcggtcgcgtccttcacgaatgtgtt
cgcgctgacaacaagagcgcggtgcgcgcgctggcactgcacccacacaacgcgctgcag
ttgctagctgcatacgacgacggctacattatcgtgtgggatttcgtggagcacaagccg
ctcgcggagctggatgccaaggcgcccgtactgtggatggcgtccagccgcacgagcgcg
tcgcagcttcttctggtcgtccagaccgacgcaaacacctggagcctaatagagttcagc
ctaaagaaaaagaaacgcggtcgcgtgttgtttcagaatagcaaaaagctgttccaggct
gctgcgctgcagagctacacgacgccacaaggtgacggcgaacaggctgttccgggagac
tttttagtagtggcggccggcgacaagctggtcactttatggctccaccaccaatcggga
gctaaagactcgggcaaccgcgtgtactcaatgcagaagctcaaccaccttcgtgacgtc
acgtgcgtcgccgtcagcccgacgcaacgggagttctctatcggcgaccagattggccag
atctaccgataccagcagcaaggagaaacagcgtccaagatgcactggcactcgcacgcc
gtgcactgcatccagtactcgagcgacggccagttcctgctgtcgggcggtgaagagtgc
gtgctggtgtcctggcaactggaaacaggtcgtcgcgcttatctgccgcgtctcccggcg
tccgtggaggtcattgcgcctcgtcaagacggtggcgtgtacgccgtgggcctggcggac
agtgtactcttccaatacaacccggtgacgcgcgaacaggagtgggaggcgcgtggcttt
gtcgcgtgccgttctacgagccgttcgcggaaccgtgtactgcagacgttgctgctatca
gagcgaaaccaggttacgcgcacagaggacgaggtgttgcctacgcttcgtgcgtcacac
tcgtgcttcagctcccgtggcggcgacttggtgacgcttcatgcgccgacgacggcgaaa
cacggcgacgaacaggctctgcgcttctggacgcgtcgtgtggacggctcgttctttgtc
aacacggcaattgacgcgcctcacggccgcgcacaggtaacgagcatgacgtactcgcct
tcccagaccgaggacagtctggtgacggcggatgaacagggagatttcaaggtgtggcag
aagacggcgacggagacaggaggcgcgtcgtggcactgtcaggcggttgtgcgcttccgt
gacgagccggtcactgccgtgggctttgcgcgcgatggatcgttgcttgctgtggcgtac
ggtaacaaactcacgctctgggacgtcgctacgcactcgttgcggcgtgtgatcccgtcc
gcggacggccagacaattactcagattgttttccccggtatcaactcgccgtacgtcgtg
gttgtgacagacagtcaggtacaggtgtggagtttgttgtcgctgtcgctgtggtggcgc
tacacggtacccaagggtgccgtcgtggccgaggaatctctgtacgaacgcttcttggtc
tggttgccagtggacgactcgaagaagaaaacgctggtgctggttttcgacgcccagacg
cctgtaccgacctgcgtgcgtgttgtagacgttggctgtaaggtgtggagcgctggtttc
caccccggcactggagacattgtgcttcttgacaacaagaccggagtatggagactggac
ggacctaaggccagatcgcaggacgcccggcgccggaaacaggcccacgttgctgccgtc
gctgcgcgcgacgccgccaaggacggcgaacaggaggccaaggctctcagcgccatctac
aacgccgccagtggcggtcgtcttgcagagaaaaagtccagccacatgcatgcggggcct
catggcgtggcggccaacggctctgcgtctagcagcctgttcgacgcgccggctcacgtc
ctgccgtccatgacggcactgtaccggtcgttcatggacaccatgctgccgaagccccac
caggttgctgaagccgacgagactgttaagaacgcgaacgaaccgtcgacgtcgcagaag
aagaagaacaagcgacgtaagaagcagcaacagcaacaagccacgacggatccgaccgtg
aatgaaagtggagagcaacgcaagcgcatgaagctccaggtagagaaagaactggctaac
acggagttgcagcagcagacatactccaaactgctcgagacatttcgcaacagtaaggcg
cgtcgggcgtag

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