Phytophthora infestans: PITG_12943
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Entry
PITG_12943 CDS
T01333
Name
(RefSeq) DNA excision repair ERCC-8-like protein
KO
K10570
DNA excision repair protein ERCC-8
Organism
pif
Phytophthora infestans
Pathway
pif03420
Nucleotide excision repair
pif04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PITG_12943
09124 Replication and repair
03420 Nucleotide excision repair
PITG_12943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pif04121
]
PITG_12943
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_12943
Ubiquitin system [BR:
pif04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
PITG_12943
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Cul4-CSA complex
PITG_12943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
WDR55
Beta-prop_EML
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_Nup120_160
WD_LRWD1
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_LRRK2
Beta-prop_DCAF12
NBCH_WD40
Beta-prop_IP5PC_F
VID27
Beta-prop_WDR11_2nd
Rieske_4
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
9478453
NCBI-ProteinID:
XP_002900497
UniProt:
D0NJX5
LinkDB
All DBs
AA seq
518 aa
AA seq
DB search
MSAFGYLLDRSVGLPSRAYRDSFYTRQTATLLQHAPSTSNFIFRQGMRVWSFSLDPAEQR
FLLVGTSQSQLLVFDLHTLDEADATCNSTYTTTNTLDPICAVGAKTESAQTLQFGISMVD
WYPVDGGLCISSSLDEHVKVWDFETFSCVSTLHLRSKIFSAKFSPVGTTHTLIAAATSRG
EVRLVDMESGATAHSLLGHKDEIWSLDWSPASEFLLATGSRDGEIRLWDIRRSGATACLL
CLNHEGKATVPGRSSLYTNVKRENPMSLSAAATARKRQRVGGASEAQARDRQRVRSRVDD
HHSRLHASTYRENRNDPHAAATMSLAIAHYAGVTSLSYTPDGRFLLSKGMDDKLRLWNAT
SGEHQFMNYTGVRRTQPRAARNVQMAVVQEGDAWESTTVFVPNGSEGELCSYRVFGDNGA
PLGSVTAHYQQITACLYRKTTREVYSAGEDGLIMKWKPPPVELNPDSVDEEHVDFRGHNG
DVEAITGATAGDEDTWSEDEEDAGTGHEFIPPILRDEF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgttcggctatctacttgaccgcagcgtggggctgccaagtcgcgcctatcgc
gacagcttctacacccgtcagactgctaccttactgcagcacgcgccgtcgaccagcaac
ttcatcttccgacaagggatgcgtgtctggagcttctctttggacccagcggagcagcgt
ttcctgctggttggtacttcccagtcccaacttttggtatttgacctgcacacactagac
gaagccgacgccacctgtaactctacgtacaccacgaccaacactcttgatcccatttgc
gctgttggagccaaaacggagagtgcccaaaccttacaatttggtatttcgatggtcgac
tggtaccctgttgacggtgggttgtgcatttccagctcgctggacgaacatgtgaaagtt
tgggatttcgagactttttcttgtgtcagtacgttacatttacgtagtaaaatattcagt
gcaaagttctcccccgtgggtacaacacacacgttgatcgctgctgcgacttcacgagga
gaagtgcgactggtggatatggaaagtggcgccaccgcgcacagtttattaggccataaa
gacgaaatttggtcgctggactggtctccagcaagtgaatttttacttgccacaggctca
agagatggcgagattcggctctgggatatccgacgatcaggagcgacggcgtgtttattg
tgtttaaaccacgaaggaaaggccactgtaccgggtagatcgagtttatatactaatgtg
aaaagagaaaaccccatgtcattgtcggctgctgctacagccagaaaacgacagcgtgtg
ggtggagcgtcagaggctcaagcaagagaccgacaacgagtgaggtccagagtggatgac
catcattcgagactacacgcctcgacatatcgagagaataggaatgatcctcatgctgca
gcgacgatgtcacttgctattgctcattatgcaggggtgacgagcttgtcgtatacccct
gatgggagatttctactgagtaaaggtatggacgacaagcttcgattatggaacgcgacg
tcgggggaacatcagtttatgaattatacaggagtgcggagaacgcaacctcgagctgcg
agaaatgtacaaatggctgtagttcaagaaggtgacgcctgggagagtacgacggtattt
gttcccaatgggtcggaaggagagttatgctcgtatcgcgtttttggagataatggtgca
ccgctagggtctgtcactgcccactatcaacaaataactgcttgtctgtatcgaaaaact
actcgtgaagtctactcagcaggtgaagatggactcatcatgaaatggaaacctccacct
gttgagttgaatcccgactctgtcgacgaggaacatgtcgattttagaggacacaatggc
gacgtggaagcgattaccggtgctactgctggcgatgaagatacgtggagtgaagacgaa
gaagacgcaggaacgggtcatgaatttattccaccaattctacgggatgaattctag
DBGET
integrated database retrieval system
