Phytophthora infestans: PITG_13404
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Entry
PITG_13404 CDS
T01333
Name
(RefSeq) DNA-directed RNA polymerase II 135 kDa polypeptide
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
pif
Phytophthora infestans
Pathway
pif03020
RNA polymerase
pif03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PITG_13404
09124 Replication and repair
03420 Nucleotide excision repair
PITG_13404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pif03021
]
PITG_13404
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_13404
Enzymes [BR:
pif01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PITG_13404
Transcription machinery [BR:
pif03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
PITG_13404
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PITG_13404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
9477971
NCBI-ProteinID:
XP_002900039
UniProt:
D0NLW9
LinkDB
All DBs
AA seq
1202 aa
AA seq
DB search
MSWENPIDSDTERDDAGDMGLAAGSAVSQEDAWAVISSYFEEKGLVRQQLDSFDEFIQNT
MQELVDDSRSIRINPEAQYAPGQAKTNTDTIYNISFGQIYLSKPTMTEADGSTSVMFPHE
ARLRNLTYSAPLYVDVVCQKYQAPSSGPANLEDMEPYDQVETPKEFIGMVPIMLRSQYCV
LTHKTDKELTELNECVYDQGGYFIINGSEKVLIAQERMSNNHVYCFRKNAASKYSWVCET
RSHVEHGVRPTSTMYVQMYQKGGGKSAITGNQIRAVIPYIRQDIPVVIIFRALGFVADRE
ILEHICYDFSDAELMERFKSSLEEAFVIQEQEVALDFIGRRGSAINVSKADRIRYAQDIL
QKEMLPHVGVEDHNETKKAYFLGYVVHKLLMCSLGRIGEDDRDHYGNKRLDLAGPLLGGL
FRILFKKLTKDVKSFLQKCVDNGKDFNLTLAIRSRTITNGLRYSLATGNWGMQKSASKAG
VSQVLNRLTYASSLSHLRRLNTPLGREGKQAQPRQLHNTHWGMICPAETPEGQAVGLVKN
LALMAYISVGSPQAPILEFLEEWATENLEEIKPQIIPHSTKIFVNGNWVGVHREPNELIR
TLRSLRRCVDIDAEVSVIRDLMNKELRIYTDAGRVCRPLFIVEDNQLLLQKEQVVKLQNH
KITNYRWHNLLTDGVVELIDTEEEEVCMIAMEPKDVGTGSQIHTHCEIHPSMILGICASI
IPFPDHNQSPRNTYQSAMGKQAMGIYCSNFRARMDTMANVLNYPQKPLVTTRAMEYLHFR
ELPSGINAIVGIASYTGYNQEDSLIMNQSAIDRGFFRSTFYRCYIDQERNKSPHGGPGGG
AGGANCEEFEKPSRENCLGLRHGSYHKLDNDGLVAPGTRVSGNDIIIGKTSPLPQSEDSS
LEQRHQKRDASTALRSHENGIIDSVMLTTNADGFKFTKVRFRNIRVPQIGDKFASRHGQK
GTIGMTYRQEDMPFTVEGITPDIVVNPHAIPSRMTVGHLVECLLGKVSSQTGDEGDATPF
TDVTVQAIADTLHNLGYQKHGNEVMYSGHTGRRLTAQIFIGPTFYQRLKHMVDDKIHSRS
RGPVTMLTRQPMEGRAREGGLRMGEMERDCLISHGSANFLMDRLFANSDAYRVHVCDICG
IIAIANLRKMTFECRTCRNKTQISQVHIPYSCKLLFQELMAMSIAPRLFTLGNPNGPKPR
QA
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
atgagctgggagaacccgatcgacagcgacacagagcgggacgatgccggcgatatgggc
ctggcagctggctcggctgtgtctcaggaagacgcgtgggccgtgatctccagttacttt
gaggagaaaggtctcgtgcgccaacaattggattcgttcgatgagttcatccagaacacg
atgcaggagctcgtagacgactctcgctccatccgcatcaacccggaagcgcaatacgcg
cccggtcaggccaagaccaacacagacaccatctacaacatctcgtttggccagatctac
ctgtccaaacccacaatgaccgaagctgacggctccacgagtgtcatgttcccgcacgag
gcgcgtctgcgtaatctcacgtactcggcgccgttgtacgtcgacgtagtgtgtcaaaag
taccaggctccttcctcagggcccgctaatcttgaagatatggagccgtacgaccaggtg
gagactcccaaggagttcatcggcatggtccccatcatgctgcgctcccagtactgtgta
ttgacccacaaaacagacaaggagctgacagaactcaacgaatgtgtgtatgaccaaggc
ggctacttcattatcaacggcagtgagaaggttctgatcgcccaagagcgaatgagcaac
aaccacgtctactgcttccgaaagaacgctgcgtccaagtacagctgggtctgtgagacc
cgctcccacgtcgagcacggggtgcgtcccaccagtacaatgtacgtgcagatgtaccag
aagggcggcggtaagagcgccatcacaggcaaccagatccgcgctgtcatcccatacatt
cgtcaagatatccccgtggtcatcatcttccgtgcacttggcttcgtggctgatcgcgag
atcctggagcacatttgctacgacttctcggacgctgagctcatggagcgcttcaaatct
tcgctagaagaagcttttgtcatccaggaacaggaagtggcgctggatttcatcggtcga
cgtggtagcgccatcaatgtgagcaaagccgatcgtatccgctatgcgcaggacatttta
cagaaggaaatgctgcctcacgtgggtgtggaggaccataatgagaccaagaaggcctat
ttcctcggctacgtggtccacaaattgctcatgtgctcgctgggtcgtatcggagaggat
gatcgtgaccactacggcaacaaacgcctggatctggctggtcctctgctcggaggtctg
ttccgtatcctgttcaagaaactcaccaaggacgtcaagtcattcctgcagaaatgtgtg
gacaacggcaaggatttcaacttgacgctggctattcgctctcgtacgatcactaacgga
ctgcggtactcgctggctaccggtaactggggcatgcagaagagcgcatcgaaggctggt
gtctcgcaggtgctgaaccgactgacgtacgcgtcgtcactgtctcacttgcgtcgcttg
aacactcctctgggtcgtgaaggtaaacaggctcaacctcgtcaactacacaacacgcat
tggggtatgatctgtccggccgagacgccggagggccaagctgtcggtctcgtgaagaat
ctggctctgatggcttacatctcggtgggctcgcctcaagctccgattctggagttcctg
gaggagtgggcgactgaaaatttggaagagattaagccccagatcatcccacactcgacg
aagatcttcgtgaacggcaactgggtgggagtgcatcgagagccgaatgagctgatccgt
acgctgcgatcgctgcgtcgctgtgtggatatcgacgctgaagtgtcggtcattcgcgac
ctgatgaacaaggagctgcgcatctacacggacgccggtcgggtgtgtcgtccgctgttc
attgtagaagacaaccagcttttgctgcagaaggagcaagtggtgaagctgcagaaccac
aagatcacaaactaccgctggcacaacttgctgacggatggcgtggtggagctcatcgat
acggaagaagaggaagtgtgtatgattgctatggagccaaaggacgtcggcacgggctcg
caaatccacacgcactgcgagatccacccgtccatgatcctcggtatctgcgccagtatc
atcccgttcccggatcacaaccagtccccgcgtaacacgtatcagtctgctatgggtaag
caggccatgggcatctactgctctaacttccgtgcaagaatggacaccatggccaatgta
ctgaattacccgcagaagcctctggttaccacgcgtgcgatggagtatttgcacttccga
gagctgccgtcgggtatcaacgctatcgtggggattgcgtcgtacacgggctacaaccag
gaagattctctgattatgaaccaaagcgcgatcgaccgtggcttcttccgttctacgttc
taccgctgctacattgaccaggaacggaacaagagtccacacggcggccctggcggaggc
gcaggtggcgccaactgcgaagagttcgagaaaccttcgcgtgagaactgcctgggactg
cgtcacggcagctaccacaagctggataacgacggtttggtcgctcctggcactcgcgtc
agtggcaacgacattatcatcgggaagacgtcgccactgccgcagtccgaagactcgtca
ctcgagcagcgtcaccagaaacgtgacgcgagcacagcgctccgctcacacgagaatgga
atcatcgacagcgtcatgttgacgacgaacgcggatggcttcaagttcacgaaggtgcgc
ttccgcaacattcgtgttcctcagattggtgacaagtttgcgtcgcgtcacggacagaag
ggtacgattggtatgacgtaccgtcaggaagacatgccgttcacggtggaaggaattacg
cccgatatcgttgtcaaccctcacgctattccgtcgcgtatgacggtggggcatctggtc
gagtgtctgctgggtaaagtgtcgtctcaaactggtgacgaaggtgacgccactccgttc
acggatgtcacagtccaagctattgccgacacactgcacaatttgggctaccagaaacac
ggcaacgaggtcatgtacagcggccacactggtcgtcgcctcacagcgcagatcttcatc
ggacccacgttctaccagcgtctgaaacatatggtcgacgacaagatccactcgcgctct
cgtggtcctgtgaccatgttgacgcgtcagcccatggaaggtcgcgctcgcgaaggtggt
ctgcgtatgggagagatggagcgcgattgtctgatctcgcacggctcggccaacttcctc
atggatcgtttgttcgcaaactcggacgcgtatcgtgtgcacgtgtgcgatatctgtggc
atcattgctattgccaatctgcggaagatgacgttcgagtgccgcacatgccgcaacaag
acgcagatctcgcaggtccacatcccatactcgtgcaagttgctcttccaggaactcatg
gccatgtccatcgcgcctcgcttgttcacgctgggcaacccaaacggtcccaagcctcgc
caagcgtag
DBGET
integrated database retrieval system
