Phytophthora infestans: PITG_14249
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Entry
PITG_14249 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
pif
Phytophthora infestans
Pathway
pif03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PITG_14249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_14249
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PITG_14249
U7-dependent histone pre-mRNA processing factors
PITG_14249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
CSTF2_hinge
RRM_10
RRM_7
RRM_occluded
CSTF_C
Motif
Other DBs
NCBI-GeneID:
9474283
NCBI-ProteinID:
XP_002899338
UniProt:
D0NNY6
LinkDB
All DBs
AA seq
414 aa
AA seq
DB search
MSNKTRASSAKERSVFVGNIPYDVTEDMLKEIFSEAGSVMNFRLVTDRETGKPKGYGFCE
YADGATALSAMRNLNGYEINGRNLRVDFADGGDKSNSAERKRHDNGGNTRPGSSGGNFRN
GADGGRPTMVTGEMAIHSIESAIARMGPVKLYDMLVQLKEHARQKPDVTKSILMANPALT
HAIVQSFKTLQIPIPSSSETQPVLLAPPSMMHQPPIMAARMMPPPPRPPMGGPMGPGPGI
LGMAPPGVQPTMLAPHPAQAPTKAGGTRWSARPGPLATQGASAAMANRPGVAIPSTSPMH
AQPQPGLMPTPPGPPQSNGPPSSNLAHANRDPRRAGRDPRLAKRPYPGEQPGLIPTPGDS
DPSKRIKPSDGAPPGQFDAIAELARDMTPQKLDMLPPNERQMLFAFMQQNNIPF
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaagacacgcgcgagctctgccaaggagcgcagcgtcttcgtcggaaacatc
ccgtacgatgtgacggaggatatgcttaaggaaatcttctcagaggccggatcggtcatg
aatttccgtctcgtgacggaccgagagaccggcaagcccaaaggctacggcttctgtgaa
tatgcagacggagcgacggcactgagtgctatgcgcaacctcaacggctacgagatcaac
ggccggaacctccgtgtggactttgccgacggtggggataagtccaacagtgcagagagg
aaacgacacgacaatggtggcaacacccgtcctggatctagcggagggaattttagaaat
ggagccgatggggggaggcctacaatggtgacgggtgagatggcgatccattccattgag
tcggcaatcgctcggatggggccagtcaaactctacgatatgctagtgcagctgaaagaa
cacgcaagacaaaagccggacgtgacgaagagcatcttgatggccaatccagctctcact
cacgctatcgtacagagtttcaagacacttcagatccccattccttcttcctcggagact
cagccggtgctgctggcccccccttccatgatgcatcaaccgccaataatggctgcaagg
atgatgccacctcctccacgtccaccgatgggtgggccaatgggtcctgggcctggcatt
ctgggcatggcgcctcccggtgtccaacccacgatgttggccccccatcctgctcaagca
ccaaccaaggctggtggtacgcgttggagtgcacgacccggacctctggctacccaggga
gcaagtgctgcgatggctaatcgacctggggttgcgatcccttctacgagtccaatgcac
gcacaaccgcagccaggcttaatgcctacacctccaggccctcctcagtctaatggccct
cccagtagcaacttggcccatgcgaatcgtgaccctcgacgcgctggaagagacccgcgg
ttggctaagagaccgtaccctggcgagcagccaggactgatcccgacacctggagacagt
gacccatccaagcgcattaagcccagcgacggtgccccacctggacaattcgatgccatc
gccgaacttgcgcgtgatatgacgccacagaaactggatatgcttccacctaacgagcgg
caaatgctgtttgcctttatgcagcagaacaacattcctttttag
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