Phytophthora infestans: PITG_14399
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Entry
PITG_14399 CDS
T01333
Name
(RefSeq) pre-mRNA-processing factor, putative
KO
K12816
pre-mRNA-processing factor 17
Organism
pif
Phytophthora infestans
Pathway
pif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PITG_14399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pif03041
]
PITG_14399
Spliceosome [BR:
pif03041
]
Complex C
Other components
Step II factors
PITG_14399
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
ANAPC4_WD40
WD40_RFWD3
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_SPT8
Beta-prop_SCAP
NBCH_WD40
Beta-prop_DCAF4
eIF2A
Beta-prop_WDR19_1st
Beta-prop_WDR75_2nd
Motif
Other DBs
NCBI-GeneID:
9479881
NCBI-ProteinID:
XP_002898868
UniProt:
D0NPR4
LinkDB
All DBs
AA seq
619 aa
AA seq
DB search
MYSTYHFQSKDTMEALGAYASSEDETPPHSTSPRSTDAPSLSLPVVNSAPFVAHSDSQDQ
ANKTAFLSAGSQRRLAVNLPVESTLAPFMGPQSGDSTELALMDPLRAGSGKEVVTGVVEQ
ADMEDYSFEAQYHTFNETLSRNIPRNRVKGAPPSAPALPGEIIPDNIVAPDEEDVFTRRN
AKKRKNQIISKERAAAEDFGDENSDGIWAPYKDKNKHFTDAELDIMNEQQKALREEHQEA
KRRKAEAKSEVDEEMDFDRMVERKTSHLLPARLKAGQTALEGKSTFLGDQEYDYQGRAWV
EPPRSLKPDDGDHQVFLPKRCVHKWTGHTKGVQAIELFPKFGHLLLSGSMDNTVRIWDVY
NERKCQRVYEGHSAAVRGINFSNDGKQFLSCSFDRFIQLWDTETGQAVHSFTTRRVPYCV
KFYPLDNTQFVVGDSNNMVVQFDTRSGEIVQEYNHHLKAVNSVTFVDDNKRFVSTSDDKK
LLVWEWGIPVPIKYISEPGMHAMPAVTLHPSGGFFAGQSLNNQIDVYTARDKFKMNRKKT
FRGHQNAGYACQIGFSPNGQFVMSGDGQGKLAFWDWKTSKMLQKLHAHDRGPTMGAIWHP
LEPSKVVSCGWDGLIKYWD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtactccacctaccacttccaatccaaggacaccatggaggcgctcggtgcgtacgca
tccagcgaagatgagacccccccacactcgacatcaccgcgctctaccgatgcaccatcc
ctctcgctacccgtagtcaactctgcgccatttgtcgcgcattcagacagccaggatcag
gccaacaagacagcgtttctatcggctggatcacaacgccgattggccgtgaatctgccc
gtagagtcgactctagcgccatttatgggccctcaaagcggcgattcaacagagttggca
ctaatggatcctttacgtgccggtagtggcaaggaagtggtcacaggtgtcgtggagcag
gcagacatggaagactatagcttcgaggcgcaataccacactttcaacgagactttaagc
cgcaatatcccgagaaacagagtcaaaggggcccctccatccgccccagcactcccagga
gagattatccccgacaatatcgtcgccccggacgaggaagacgtgttcactagacgcaac
gccaagaagaggaagaaccagattatttccaaggaacgagcagcagctgaggactttgga
gacgaaaactcggacggtatttgggctccatacaaggacaagaataaacacttcaccgat
gctgagctagacatcatgaacgaacagcagaaggcactgagggaagaacaccaagaagcc
aagagacgtaaggccgaagcgaagtcagaagtggatgaggagatggactttgaccggatg
gtagagaggaagacgtcgcacttgttgccagccagattgaaggctggccagacagcattg
gaaggcaagtcgacgttcttaggagatcaggagtacgactaccagggacgtgcgtgggtg
gagcctccacgctctctgaaacccgacgacggagaccaccaggtgttcctacccaaacgg
tgtgtacacaagtggacgggacacaccaagggcgtccaagctatcgagctgttccccaag
tttggtcacttgttgctttctggcagtatggacaacactgtgcgtatctgggacgtatac
aacgaacgcaagtgccaacgtgtatacgaaggccactcagctgctgttcgtggtataaat
tttagcaatgatggcaaacagtttttgagttgcagcttcgatcggtttatccagctatgg
gacacagaaacgggacaagcggtgcactcgttcacaacgcgtcgggtcccgtactgtgtc
aagttctacccgctcgacaacacgcagtttgtagtgggcgactcgaacaatatggtggtg
caatttgacactcgatccggcgagatcgtgcaggagtacaaccaccacttaaaggccgtg
aacagtgtgacgttcgtggacgacaacaagcgctttgtgagtacctccgatgacaagaag
ttgctggtgtgggagtggggtattcccgtcccgattaagtacatttccgagccgggtatg
cacgcgatgccggctgtgacgctgcatccgagcggtggcttctttgccggccaatcgctc
aataaccagatcgacgtgtacactgcacgtgacaagttcaaaatgaaccggaaaaagacg
ttcaggggtcaccagaatgccggatatgcgtgccaaattgggttctctccgaatgggcaa
ttcgtcatgtcgggcgatggccaaggtaaactggcgttctgggactggaaaacgtccaag
atgctccagaagctgcatgcgcacgaccgcggtccgactatgggggccatttggcatcca
ctcgagcccagcaaggtcgtctcgtgcggttgggacgggctcatcaagtactgggattag
DBGET
integrated database retrieval system
