Phytophthora infestans: PITG_14575
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Entry
PITG_14575 CDS
T01333
Name
(RefSeq) U6 snRNA-associated Sm-like protein, putative
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
pif
Phytophthora infestans
Pathway
pif03018
RNA degradation
pif03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PITG_14575
09123 Folding, sorting and degradation
03018 RNA degradation
PITG_14575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_14575
03041 Spliceosome [BR:
pif03041
]
PITG_14575
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
PITG_14575
mRNA degradation factors
5'-3' decay
Lsm complex
PITG_14575
Spliceosome [BR:
pif03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
PITG_14575
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
BPL_C
Motif
Other DBs
NCBI-GeneID:
9478679
NCBI-ProteinID:
XP_002898478
UniProt:
D0NQK7
LinkDB
All DBs
AA seq
106 aa
AA seq
DB search
MAANGASGGGSRKDPILDLAKYIDQEVRVKFHGGREVTGTLKGYDQLVNLVLDDCVEFLR
DPSDEYRITDETRKVGLVVCRGTSVMLVSPVDGTAEIPNPFLQQEG
NT seq
321 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgaacggcgcaagcggcggcggcagtcgcaaggaccccatcctggatctggcc
aagtacatcgaccaggaggttcgcgttaaatttcatggcggtcgcgaggtgacgggcacg
ctcaagggatacgatcaactggtgaatttggtgctggacgactgcgtcgagttcctgcgt
gacccgagcgacgagtaccgaattacggacgagacgcgcaaagtgggtctagtggtgtgc
agaggcacatccgtcatgcttgtgtctcccgtggacggcacagctgagatccccaaccca
ttcctacagcaggaaggatag
DBGET
integrated database retrieval system
