Phytophthora infestans: PITG_14853
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Entry
PITG_14853 CDS
T01333
Name
(RefSeq) exosome complex exonuclease MTR3-like protein
KO
K12587
exosome complex component MTR3
Organism
pif
Phytophthora infestans
Pathway
pif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PITG_14853
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_14853
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PITG_14853
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
DUF1797
Motif
Other DBs
NCBI-GeneID:
9467968
NCBI-ProteinID:
XP_002899049
UniProt:
D0NP71
LinkDB
All DBs
AA seq
252 aa
AA seq
DB search
MQNCYYPLPVQPQLAAPKDDDAPMERLDKSRTSSDEMRRPFMQLGAVSGAAGSAYVELGR
TRVLCAVYGPRTDTRARREFSKDGQLVCDVKYAPFADKLTRRERGQDPDEMELSAIVEEA
LAPAVMLHKLPKCIISVFVTILEDDGGVLAAALNCASLALADAAVEMYDVVTASSAGIVN
GSVVLDPSREEEQRGDGKLALAYMPSMGRVTYMLQAGKIHHTQLQEAVDLCTDACTGVIR
SLLTASLVQALS
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgcagaactgctactatccgctgcctgtacagccgcagttggccgccccgaaggacgac
gatgcgcccatggagcggttagacaagtcgcgcaccagttccgacgagatgcgccgacct
tttatgcagttgggagccgtgagcggcgctgccggatcggcgtacgtggagcttggccgc
acccgcgtgctttgtgctgtttacggcccgcggacagacacgcgcgcacgccgtgagttc
agcaaggacggtcaattagtgtgtgacgtcaaatacgcgccgtttgcggataaattgacg
cggcgtgaacgcggacaggacccggacgagatggaactgtcagccattgtggaggaggcg
ctggcacccgctgtgatgctgcacaaactgcccaaatgcatcatatcagtgttcgtgacg
attttggaggacgatggaggtgtgctcgcagctgcacttaactgcgcgtccttggcactg
gctgatgccgccgtggagatgtatgacgtggtcacggcgtcgagcgcgggtattgtgaac
ggttcggtggtgttggacccaagcagggaagaggagcaacgcggagatggcaagctcgcg
ctggcctacatgccgtcgatgggacgtgtcacgtacatgctacaggccggcaagatccac
cacacgcagctacaagaggcggtggatctctgcacagacgcatgcaccggcgtcatacgg
tcgctcctaactgcatcgctcgtacaggcgctgtcctga
DBGET
integrated database retrieval system
