KEGG   Phytophthora infestans: PITG_16023
Entry
PITG_16023        CDS       T01333                                 
Name
(RefSeq) transcription initiation factor TFIID subunit, putative
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pif  Phytophthora infestans
Pathway
pif03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    PITG_16023
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pif03021]
    PITG_16023
   03036 Chromosome and associated proteins [BR:pif03036]
    PITG_16023
Transcription machinery [BR:pif03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     PITG_16023
   Coactivators
    SAGA/TFTC/STAGA complex
     PITG_16023
Chromosome and associated proteins [BR:pif03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     PITG_16023
    STAGA complex
     PITG_16023
    TFTC complex
     PITG_16023
    SAGA complex
     PITG_16023
    SLIK complex
     PITG_16023
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz TFIID_NTD2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st WDR90_beta-prop_4th Beta-prop_SCAP ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_RIG_2nd Beta-prop_IFT122_1st Beta-prop_EIPR1 Beta-prop_DCAF4 NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_SPT8 PROPPIN Cytochrom_D1 Beta-prop_Nup120_160 WDR54 WD_LRWD1 Ge1_WD40 PEP5_VPS11_N CCDC71L Beta-prop_NWD2_C
Other DBs
NCBI-GeneID: 9473817
NCBI-ProteinID: XP_002897804
UniProt: D0NSP2
LinkDB
AA seq 848 aa
MPSLASPAEHGASLRPTAPPLLQHASPSRAHAVAGLQSLDLSAKADANASVMDELLLKYL
QTRGYHISRGESQQPQATEEERRRLLGDRAARIENASIDKYAQQMGLTTEACTANHLLFY
GLTSGNSEAYDEAYGKLLDWICNSLDMYRNELHTVVFPIFVHCFLELLAKGFVEAGRRFL
HRYAPDHTRLHLEELRTLSLVFSPQHLRENEYVREVLQSKFNVEMSLLSFELLNTFLSQE
RLFLLLSIVNERVNLVVTSNQPGFQIQQLQDAPTPVETLNNLAPKNDATSGFKTSDELAQ
AIAASNHPSESEIAMPLTTGPYDVDYLVRAASGSAAATGRNGYTVHDLNAIPVNWGVLPE
RKVHDPSAEDEEDGLEGGAASNGAAGGTSASAADKGKASTTSVDAHRKHKRVKLSDDGTT
GKKREQLEETGPLPDRKNAFNAEVMEKLVLRVPASTKEHIFEDIRVRAPVSRSALPSALC
FTLLNSATHINNMCFNDDVTMVGAACDDASFRVWRNDDQPLGAAAGSVYHGNGGPSFAEA
EEDEKMAVLRGHSSAVYGASFSPDNRFALTASADSTVRLWSLAARSNLVVYRSHQGAPVW
DVTFAPLGYYFATCSMDRTARLWSTDHMTPLRVFAGHLSDVDCVRFHPNHNYLATGSSDK
TVRLWDVQSGKCVRVFTGHFRGVQCLAFSRNGRYLASSGEDQYINIWDLQAGKRLETLMG
HKAMVTSLDFSQESTILASGGMDSTVRIWDMKALTEKPTTYSSLSGAMEDLHVSSSDAAF
ELNGTQLPGRSRFVKPVPMVRPGAVQELPSSRFLLKTLRSKQTPMYRVHFTPRNLLLAGG
IFQPKMET
NT seq 2547 nt   +upstreamnt  +downstreamnt
atgccgtcgctcgcttcgcctgcggaacacggggcctctctacgcccgacggcgcctcca
ttactgcagcatgcttctcctagtagagcacacgctgtcgcagggctgcagtcgttggat
ctttcggctaaagcggatgccaacgcctctgtcatggacgagctactactcaagtatctg
cagacacgaggctatcacatctccagaggggagtcgcaacagccacaagccacagaagag
gagagaagacgactgctaggcgacagagcggcacggatagagaacgccagcatcgacaaa
tacgcgcagcagatgggcctgaccacggaagcgtgcactgcgaatcacttgctgttctac
ggactcactagtggcaattctgaagcttacgatgaagcgtacggcaagctgctggactgg
atctgcaactcgctggatatgtatcgcaacgagctccacactgtggtcttcccgatcttc
gtgcactgcttcttggagctgttggcgaagggattcgtagaggcaggcaggcgtttcctc
catcgatatgcaccagatcacaccaggctgcacctggaggaactgcgcacactcagtctc
gtgttctcgccacaacatttgcgtgaaaacgagtacgtgcgcgaggtactacagagcaag
tttaacgtcgagatgagcttgctgtctttcgagctgctcaacacatttttgagccaggag
cgtctctttttgctgctatcaatcgtcaacgagcgcgtcaatctcgtggtgacgtcgaac
caaccaggttttcagattcaacagcttcaggacgcgcctacgccagtcgaaacgctgaat
aatttggcgcccaagaacgacgccaccagcggatttaagacgtcggatgaactggcgcag
gctatagcggcatcgaatcatccaagcgagagtgagatcgctatgcccttgaccacgggg
ccctacgatgtcgactatttggtacgcgctgctagtggttctgcggcagctactggacgc
aatggctacacggtgcacgatctcaacgccattcctgtgaactggggagtgcttccggag
cgcaaggtgcatgatccctctgcggaggacgaagaagacggactagaaggcggtgcagcc
tccaacggagcagcagggggaacctctgctagtgctgcagataaaggcaaggcgtcgact
acgtctgtagatgcgcaccgtaaacacaaacgtgtgaagctgtcagatgacggcacgaca
ggcaagaaaagagagcaactggaggagacaggcccgctacccgatcggaagaatgctttc
aacgccgaagtgatggagaaactcgtgcttcgcgtacctgctagcacgaaggaacatatt
ttcgaggatattcgagttcgcgctccagtgagtcgaagtgcgctgccttcggctctgtgc
tttacgcttctgaattcagcaacacacataaacaacatgtgcttcaacgacgacgtgact
atggttggcgctgcatgtgacgacgcctccttccgtgtatggcgcaacgatgatcagcca
ttgggcgcagccgccggatccgtgtaccatggcaatggagggccgtcttttgcagaagca
gaggaggacgagaaaatggctgtcttacgaggccactcgagcgctgtatatggcgcaagc
ttttcccctgacaatcgattcgcactcacggcatcagctgactccactgttcgactttgg
agtctggcggcgaggagcaacttggtcgtgtaccgctcgcatcaaggagctccggtatgg
gatgttacctttgcgccgctaggatactactttgcgacctgctccatggatcggacagcg
cggctctggagtacagatcacatgacgcctctacgtgtttttgctggtcatttatcggat
gtggactgcgtgcgtttccatccgaaccacaactatttggccactggatccagcgacaag
actgtacggctgtgggacgtgcagtctggcaagtgcgttcgtgtattcacgggccatttt
cgtggggtgcagtgcctagcattctcgcgcaacggtcggtatctcgcaagctcaggagag
gatcagtacatcaatatttgggatctacaggcaggcaaacgtctggaaaccctcatgggc
cataaggcaatggtcacgtcgctagacttcagccaggagagcacaatattagcaagtggt
ggcatggactccacagtgcgtatctgggatatgaaggcgctcacggagaagcccacgacg
tactcttccctctcgggggcaatggaagacttgcacgtgagttcatcggatgcagccttc
gagttgaacggaactcagctaccgggccgaagccggtttgtcaaacctgtgccgatggta
cggcctggagcggtacaggagctaccgtcctcgcgtttcctcctcaagacgctgcgctcc
aaacagacaccaatgtatcgggtccactttacgccgcgcaacctgttgcttgctggcggc
atattccagccgaaaatggagacataa

DBGET integrated database retrieval system