Phytophthora infestans: PITG_16160
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Entry
PITG_16160 CDS
T01333
Name
(RefSeq) polysaccharide lyase, putative
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
pif
Phytophthora infestans
Pathway
pif00040
Pentose and glucuronate interconversions
pif01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PITG_16160
Enzymes [BR:
pif01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PITG_16160
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
Motif
Other DBs
NCBI-GeneID:
9475310
NCBI-ProteinID:
XP_002897922
UniProt:
D0NT10
LinkDB
All DBs
AA seq
506 aa
AA seq
DB search
MVKSFAPFVTSAALLLAVATSASLPNGSWPASKGTVQYSKAYVVKAGEVFDGKMKTFERS
DVSCEGQSESGADTAVFNVEAGGHLKNVIIGKNQMEGVHCDKHDCIIENVWWDDVCEDAL
SVKGGTASSVTKVIGGGARYADDKVIQHNGFGTVDIDGFYGEDISKLYRSCGTCGNRPKK
VSVSNTYVLNPTNAIVTVNKNWGDQATLRNVWVKSSKPTVKVCQWSQGNANGEPKMLGHG
PSNPLCKYSESDVHINEDISEAATTPSNTTASVPDGTWPASTGIVRYKKPYTIKAGEVFD
GKMQTFERSDITCSGGEGQKDTAVFLVEAGGTLKNAIIGKNQKEGVHCDYHDCTIENVWW
DDVCEDALSIKGGSASSVTTVTNCGARYAEDKVVQHNGYGTVKIKGFFAQEFGRLYRSCG
TCGNIPRKVTVENVYAIDPLVSVVTVNKNNNDQATLKNIFVKTTDGKKNVKVCQWSQASK
TPSNVGDGPSGKLCQYSTSDVHINED
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagtctttcgcgccgttcgtgacgtctgcggctctcctcctggcggttgccacc
tcggcttccttgccgaacgggtcgtggccagccagcaagggcaccgtgcagtactcaaag
gcctacgtcgtcaaggctggcgaggtcttcgacggcaagatgaagacgttcgagcgctcc
gacgtgtcgtgcgagggccaatccgaaagcggggcggacacggccgtgttcaacgtcgag
gccggcggccacctcaagaatgtcatcatcggcaagaaccaaatggagggcgtgcactgc
gacaagcacgactgcattatcgagaacgtgtggtgggatgacgtgtgcgaggacgccctc
agtgtcaagggcggaacggcgtccagcgtgaccaaggtcatcggtggcggggcccggtac
gccgacgacaaggtcatccagcacaacggcttcggtacggtcgacatcgacggcttctac
ggcgaggacatcagcaagctctaccgttcgtgcggcacttgtggcaacagacccaagaag
gtgtccgtgtccaacacgtacgtcctcaacccgaccaacgccatcgtgacggtcaacaag
aactggggcgaccaggccacactccgcaacgtctgggtcaagtcgagcaagcccaccgtc
aaggtgtgccagtggtcgcagggtaacgccaacggtgagcccaagatgctgggccacggt
ccgtccaaccctctgtgcaagtactcggagagcgacgtccacatcaacgaggacatttcc
gaggcagccacgactccttcgaacacgacggcttccgtcccggacggcacgtggccggcc
agcacgggcatcgtccgctacaagaagccgtacacgatcaaggccggtgaggtgttcgat
ggcaagatgcagaccttcgagcgctcggacatcacgtgctcgggtggtgagggccagaag
gacacggccgtcttcctcgtggaggctggcggcactctgaagaacgccatcatcggcaag
aaccagaaggagggcgtgcactgcgactaccacgactgcaccattgagaacgtgtggtgg
gatgacgtgtgcgaggacgcgctgagcatcaagggtggctcggcgtccagcgtgacgacc
gtgaccaactgcggcgcccgctacgccgaggacaaggtggtacagcacaacggctacggc
accgtcaagatcaagggtttcttcgcgcaggagttcggcaggctctaccgttcgtgcggc
acgtgcggcaacattccccgtaaggtgacggtggagaacgtgtacgccatcgacccgctt
gtgagcgtcgtcactgtcaacaaaaacaacaacgaccaggccacgctcaagaacatcttc
gtcaagacgacggacggcaagaagaacgttaaggtgtgtcagtggtcgcaggccagcaag
acgccgtcgaacgtgggcgacggtccgtcgggcaagctttgccagtactcgacgagtgat
gtgcacatcaacgaggattga
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