Phytophthora infestans: PITG_16854
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Entry
PITG_16854 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K20476
RAB6A-GEF complex partner protein 1
Organism
pif
Phytophthora infestans
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pif04131
]
PITG_16854
Membrane trafficking [BR:
pif04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
PITG_16854
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RIC1_2nd
RIC1
ACBP
ANAPC4_WD40
Beta-prop_VPS8
Beta-prop_EML_2
Beta-prop_IFT122_1st
Beta-prop_THOC3
PDZ
Beta-prop_WDR35_2nd
Beta-prop_HPS5
Phenol_hyd_sub
Motif
Other DBs
NCBI-GeneID:
9469416
NCBI-ProteinID:
XP_002897292
UniProt:
D0NU95
LinkDB
All DBs
AA seq
1469 aa
AA seq
DB search
MFFCSGPPRTYAALAAPERMEDVALAMHPSQFVFAGVTSSHVALWSASLGLQGTGRRLLA
RCRRGGQWSETRQLWAEWVSGDRVAVVEKDSQSVEFYAFDGLSKLLQRAETPNTHLTDGP
TVDSNTMLDQPSFAEPEQEEGDGPTATSKGLQLVAKFVEDYPLNQGASQSDYEDVAACMS
AVPGGKYVFVGMVSGLICVVEVADSRDSSDSQSSWFSNADSSTKLWKIDVRTHLAVADDA
DPASCFDLTCATADPVAKITSLCLVASFDGGKCFIMLLSPAKKSIDQLLSLINSEREGSR
GSSSTGRCTTTSLDASGSQLALGWSDGGVSLFRLSLSNIKLSLGAWGYTPEDVGSVTALA
WSYDGRSVAVGYELRGFSLFSTDECRLMSSLPQHNQERPEKMDECNMREVCAFGVLALQW
TRESNSLLVVPRGEQSTQLVELPEDEILKEIEDEADVDVTEADDLFESVEATVRKAQDGL
CLSLSGAPGRCGAWVRSDKSFTKRADGGVGPAEACGLIQGGDLLVGINDNLKVVNLPFEQ
IVAEIKQLPDDEDVALTFMRLKWDQVFPLAVKALSSSEFLDAHGIHLREDETLSIREYAL
RMQALHGDCDLEERPPLLELERRAKFDGWEALQGTCTRVAKHKYVKLVFALFPVWNPRHF
VNVMTEYWNALLAQKVYRRKQKRLEELHAHRRLVKMRQRSAIAFVEFDFAKTVPLSGGKS
SRLALVERTSVRLVAAPSLDDPCAVTSCVNWSVPTEFEKCCPLRLVALSASGNHVAVAGQ
RGFCLLNIVTGKWRMFGNVNDEQDMFVYSLLWVGEDAIVVNFTRFSEQHQSLHLQAYPRN
HLDEESILEQLVFAREGEMPPGGRDGDDDCFIIMDTDSALRNLFCVSRSELWCLELQHGG
TIKQNDLNLHMQLKRQLSLPSRVAASQAAGTCSRHAIVDFAVLPRFLHVQDDKLREQQQR
KYRQEREHEQDDAGWLSSVVNMLVGGEVPDQYTPEQVLPRFAFLDSRGDVTVWDPENRSQ
RLLCSNVSTMARLFVTCASWPAPCRLIYGLYGPDGMKVWLPLLDGVYMTHTKAFEQDSRR
LETFLACHDPLRAKTYEIEFGTAPATAELYDQVLGEYGITLDGFLSRTGMQEGHNNLRGC
VTSVDDPSAKDRMLRFDYDVKVLGAEQAFGLLVGVSQDVYVPSGVLIPCYDVFTRVQPIF
HTLLCFLVQNEQLSWARLVLSGVRRQFALSTPTQELFLHSMLEACYGKSCPEEKLHTAIK
LLRPDSGDCETDIAEYCEIVAHVARKSEPSRLKVLFPAAGDPMDLLAVCQRRSELRTAAN
FLLILEECSSASGSSLPLRMESAAELLRQSVDQEERLLAQHVVRVARDWEHHVEQSETSI
DEQLAALAWNNLVRGEYERVVWCVEDLQAKLPRKSADEREAEDSATILDRLYQTFIQGNK
RRQLRILLQAVTEAHYEDWVARIKHVMEQ
NT seq
4410 nt
NT seq
+upstream
nt +downstream
nt
atgttcttctgcagcgggcccccacgcacgtacgcggcgttggcggcccccgagcggatg
gaggatgttgcgctggccatgcacccgtctcagtttgtgtttgcaggcgtaacgagctct
cacgtggcgctgtggagcgcttcgctgggactacagggaacaggacgccgccttttagcg
cgatgtcgccgtggcggtcaatggagcgagacacgtcagctttgggctgaatgggtctct
ggagatcgtgtagccgtcgtggagaaagattcgcaatccgtcgagttctacgcgttcgac
ggactaagcaaactactgcagcgcgctgaaacacccaatactcacttgacggacggccct
accgtagattctaacaccatgctggaccaaccgtcgttcgcggagcccgagcaggaggag
ggagatgggccaacggcaacttccaagggacttcaacttgtcgctaagttcgttgaagac
tacccgctgaaccaaggcgcgtctcagagcgattatgaagacgttgccgcgtgcatgagt
gctgtgcccggcggcaagtacgtattcgtgggcatggtcagtggcctcatctgcgtcgtg
gaggttgccgactctcgcgactccagcgacagccaaagctcgtggtttagcaatgcggac
agctccaccaaactctggaaaattgatgtccgcactcatctggcagttgccgacgacgcc
gatccagctagttgctttgatctcacgtgcgcaacggcggaccccgttgcaaagattacg
tcattgtgtctcgtggcaagtttcgacggcgggaagtgtttcatcatgttgctgtcaccc
gccaaaaagagtatcgaccagttgttatcgctgattaactcggaaagagaaggcagtagg
gggtccagctcaactggccgttgcaccacgacgagtttggacgccagcgggtcgcaactc
gcgctcggatggtcggacggcggagtgtcgctgttccgattatcactgagcaacataaaa
ttaagtcttggagcctggggatacaccccggaagacgtcggatcggtcaccgcattagcg
tggtcctacgacggccgcagtgtggcggtgggctacgagttgcgtggcttttctttattc
tcaaccgacgagtgtcgcttaatgtcgagcttaccgcagcacaaccaggagaggcccgag
aaaatggacgagtgcaacatgagagaagtctgcgccttcggagtcctcgcgctgcagtgg
acaagagagagcaactcgctgcttgtcgtgcctcgaggcgagcagtcgacgcagttggtt
gagctcccggaagatgaaattttgaaggaaatcgaggacgaagcggacgtggacgtgacg
gaagccgacgatctgttcgaaagtgtcgaggcaactgtgcggaaggctcaggacggtttg
tgtctgtcactctcgggggctccggggcgctgtggcgcgtgggttcgaagcgacaaaagc
ttcacgaagcgcgccgacgggggcgtagggccagccgaggcctgtgggcttatccaagga
ggcgacttgttggtggggattaatgacaacttgaaggttgtgaacctcccttttgagcaa
attgtcgcagagatcaagcaacttccagatgacgaagacgtggcgctcacgtttatgcgc
ctaaagtgggaccaagtgttcccattggctgttaaagcgctgtcctcttcggagttcctg
gacgcccatgggattcacttgagggaggacgagacgctgagtatccgcgagtatgcgctc
cgcatgcaggcgctccacggagactgcgacctggaggagcgtccgccgcttctggagctc
gaacgacgcgcgaaattcgacggctgggaggcgctccagggcacgtgtacgcgcgtggcc
aagcacaagtacgtcaagctggtgttcgctctgttcccggtgtggaatcctcggcacttt
gtgaacgtcatgacggaatactggaacgctcttctggcgcagaaggtgtatcggaggaag
caaaagcgacttgaggagctgcacgcgcatcgccgattggttaaaatgcgtcagcgctcg
gccattgcgttcgtcgagttcgatttcgccaaaactgtgcctctgtccggcgggaaatcg
tctcgtctggcgttagtggagcggacaagtgtgcggctagtggctgctccgtctctggac
gacccgtgcgcggtgacgtcctgtgtgaactggagtgtccccaccgagttcgagaaatgt
tgtcctctgcgtcttgtcgcgctaagtgcgagtgggaatcacgtggcggtggcgggacag
cgaggcttctgtctgctgaatatcgtaacgggcaagtggcgaatgtttggcaacgtgaac
gacgagcaggatatgtttgtatactcgctgttatgggtgggcgaagacgcgattgtagtc
aatttcacgcgcttcagtgagcagcatcagtcgctgcacttgcaggcgtatccgaggaac
cacctggacgaggaatctattctggagcagctcgtgttcgcgcgtgaaggggagatgccg
ccaggaggacgtgacggtgacgacgactgcttcatcattatggacacagacagtgcgctc
cggaacttgttttgtgtctcgaggagcgagttgtggtgcttggaattgcagcacgggggc
actatcaagcagaacgaccttaatctgcacatgcagcttaagagacagcttagcttgccg
tccagagtcgccgcgtctcaagctgcggggacgtgcagccgccacgcgatcgtggacttt
gccgtgctgccgcgttttctgcacgtccaagacgacaagctacgcgaacagcagcagcga
aaataccgacaggagcgagagcacgaacaggacgacgccgggtggctctcgagtgtcgtc
aacatgctcgtggggggagaagtgcccgaccaatacacgcccgaacaagtgctgccgagg
ttcgcgttcctcgacagtcggggcgacgtgacggtgtgggacccggagaaccgctcgcag
cgtctgctgtgctcaaatgtgagcaccatggcgaggctgttcgtgacgtgtgcgtcctgg
ccggcgccgtgtcgactgatctacggactgtacggcccagacggcatgaaagtgtggctg
ccgctgctggatggcgtctacatgacgcacacgaaggcgttcgaacaagacagtcgacgt
ctggagacgtttctggcgtgtcacgacccgctgcgagccaaaacgtacgaaatcgagttc
gggacggcgccagcgactgcggaattgtacgaccaagtcctcggcgagtatggtatcacg
ttggacgggttcttgtctcgcactgggatgcaagagggacacaacaatctacggggctgt
gtgacgtcggtggacgatccttcggcgaaagatcgcatgctacgcttcgattatgacgtc
aaggtgttgggcgctgaacaggccttcggactgctggtgggggtctcgcaggatgtctac
gtgccgtcgggcgtgctcatcccgtgctatgacgtttttactcgagtccagccgattttc
cacacgctattgtgctttttagtgcagaacgagcagctctcgtgggcgcgtctagtgctc
agcggagtgcggagacagtttgcgctgtccacccccacccaggaacttttcctgcactcg
atgctcgaagcttgttacgggaaatcgtgtcccgaggagaagctacacaccgccatcaag
ctcttacgtccggacagtggagactgcgagacggacatcgccgagtactgcgagattgtg
gcgcatgtggctcgcaagagtgagccctctcgccttaaagtactgttcccggcagcgggg
gacccgatggatttactggcggtttgtcagcgacgctcggagcttcgcacagctgcgaat
ttcctgctgattttggaggaatgttccagtgcgtcgggctcgtcgttgccgctgaggatg
gagagcgcggccgagttactgaggcaaagtgttgatcaggaagagcggctactggctcag
catgtggtgcgtgtggccagagactgggaacatcacgtggagcagagcgagacgagtatt
gacgaacaactggcggctctggcgtggaataatctggttcgtggcgagtacgagcgtgtg
gtgtggtgtgtggaggatctacaggccaagctgccacggaagtcggcggacgagagggag
gcggaggacagcgcgacgattctagaccgactgtatcagacttttatccagggcaacaag
cggagacaactcaggatcttgctgcaagcggtgacggaggcgcactatgaggattgggtg
gcgcgtattaagcacgtgatggagcaatga
DBGET
integrated database retrieval system
