Phytophthora infestans: PITG_17723
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Entry
PITG_17723 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K07573
exosome complex component CSL4
Organism
pif
Phytophthora infestans
Pathway
pif03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PITG_17723
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_17723
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PITG_17723
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
PITG_17723
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
S1_RRP5
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
9466381
NCBI-ProteinID:
XP_002997589
UniProt:
D0NYI6
LinkDB
All DBs
AA seq
168 aa
AA seq
DB search
MSSSSDIAVPGQHLAAVDSKLKAGTGTYVRDNVIFASIYGKWRVSQDVVEVTRANKTVAS
AQVLRLGDIVICRVVKITSRQVMVDILCVGETVLKEVFPGTIRLEDVRNHDIDKLVMDEV
FSPGMLVKATVLSFGDTRSYYLSTAKPGLGVVRQPTKQDSQATDMETD
NT seq
507 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctccagtgacatcgcggtgcctggccaacacctggccgcagtggacagcaag
ctcaaggctggtaccggaacctacgtacgcgataatgtcatcttcgcatctatctatggc
aagtggcgcgtctcgcaggacgtcgtagaggtgacgcgggccaataagacagtggcgtcg
gcgcaagtgctgcgtcttggcgacattgtcatctgccgcgtggtaaagatcacgtctcga
caagtgatggttgacattctgtgcgtgggtgaaactgtgctaaaggaggtcttcccggga
actatcaggttggaggacgtgcggaaccacgacatcgacaagcttgtgatggacgaggtc
ttctcccctggaatgctcgtgaaagcgaccgtgctttcattcggtgacactcgctcctac
tacctctctacagcaaagccaggactcggtgtcgtacgtcagcctacaaagcaagatagc
caggcgaccgacatggaaacagattag
DBGET
integrated database retrieval system
