Phytophthora infestans: PITG_17950
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Entry
PITG_17950 CDS
T01333
Name
(RefSeq) hypothetical protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
pif
Phytophthora infestans
Pathway
pif03440
Homologous recombination
pif03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
PITG_17950
03460 Fanconi anemia pathway
PITG_17950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pif03400
]
PITG_17950
Enzymes [BR:
pif01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PITG_17950
DNA repair and recombination proteins [BR:
pif03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
PITG_17950
FA (Fanconi anemia) pathway
Downstream FA components
PITG_17950
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
PhoH
ResIII
Motif
Other DBs
NCBI-GeneID:
9464127
NCBI-ProteinID:
XP_002896272
UniProt:
D0NXC2
LinkDB
All DBs
AA seq
988 aa
AA seq
DB search
MSDAAQNRFMIMGYNVEFPQGKRPFPAQFAVMNKVLTALKTEQHALLESPTGSGKTLALL
CSSLTFQKQFVKDKVEAHRKQQEDPKFKELEAKKHAQEAQLRAMETQMQLMEAQQQIEQA
RKARRVTEEEADDATQTTFQPTQETQATQVAGQQLEQDDDDVAPTQPSANTSAWMTTRKR
ELETDSTAVKKKRVLPKSFAFAAKDADVKVKAEQLDVAPDQPKKKRVVPPQIFFCSRTHS
QLAQVVDELKNCPVSYLDSPEDSNTYTKQLQTCVLGSKRNMCVNRKVNRDPSQVDEKCRL
ALEGSSCSFFRKRKKTNDLKRSVPPVWDIEDLVKLAQKHRECAYFHAREALDHANIVFAP
YNYLLDPTIRGAVGITLKDAIIVLDEAHNVEDTCRSSASVEVTTDALAASIKAFTIVIKH
GNRPKTYNALLKLLNGINRWLQSVDSNANAILQPSGYEEKSKVWDGADALAMLAEYSGLT
KDNLEEMKENVQEVREYENGLGNSAESSQQPPTQAAQDAAANPTGASVLLGALALATVES
IMNVVDYMFRDRLKFIEDFKLVVIKSKSTWKENASFRSPTKRNGGDEWELKMCIWCLNAA
VAFSDIASQARSVILTSGTLSPMESFAGELGVDFPIRLEANHVVNMRKQVFIGAVMHGPG
NVDLQSTYNNQQDPRYQDSMGQLLLQYSQAIPGGILMFFPSYSLLNKLTTRWKKTKLWGE
IEQFKAIYSEPRNAGKDFDRLLEDYKETITCSKDGDDGNKTGAVFLAVYRGKVSEGIDFS
NDNARAVLCVGIPFPSVKELQVSLKRKYQDEKSRMNMKLVNGHIWYNLQAFRALNQALGR
CIRHRQDYGAIMLLDSRHRFNKHTKSLSKWMRPYIQEFEHSQMCVPMFSDFFQRNKMELP
QVVSVPSVDTAGSAASEWKSKRAPLVLEYEAGKNGNKGKKVTIAQEKRMAAPSLSSTLTT
VKDFMAKQNQESDPQESVFSIFRPQPSK
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccgcgcaaaaccgctttatgatcatgggctacaacgtcgagttccctcaa
ggcaagcggccgttccctgcacagttcgcagtcatgaataaggtactgacggcacttaag
acggagcaacacgcactgctggaatctcctacagggtcgggtaagactctggcgctgttg
tgctcgtctctgacgttccagaagcagtttgtcaaggacaaagtcgaggcacatagaaaa
cagcaggaagacccgaaattcaaagagctggaggccaagaaacatgctcaggaggcccag
ttgagagccatggagactcagatgcagcttatggaagctcagcagcaaatagagcaggct
cgaaaggcgagacgagtgacagaggaagaggcagatgacgctacccaaactacttttcag
cctacccaagagacacaagccacacaagtggccggacagcagctagaacaggacgatgac
gacgtggcgcccacgcaacccagtgcgaataccagcgcctggatgaccaccaggaagcgc
gaactagagaccgactctaccgccgtcaagaagaagcgagtgctgcccaaatccttcgcc
ttcgccgctaaagacgcggacgtcaaggtcaaggcggaacagctcgacgtcgcccccgac
caacccaaaaagaagcgcgtggtgcctcctcaaatcttcttctgctctcgcacgcactcg
caactggcacaagtggtggacgagctcaagaactgccccgtgtcgtatctcgactcgccc
gaagactccaacacgtacacgaagcaactgcagacgtgtgtgctgggctcgaagcgcaac
atgtgcgttaaccgcaaagtgaatcgagatccttcacaggtggacgagaagtgtcgattg
gcactggaaggctcgtcctgctcgttctttagaaagcgcaagaaaacgaacgacctaaaa
agaagtgtgccacctgtttgggacatcgaagacctcgtcaagctggctcagaaacaccgc
gagtgtgcgtatttccacgcacgtgaagccttggaccacgccaacatcgtcttcgctcca
tacaattatctattggacccgacgatccgtggggctgtggggatcacgctcaaagacgcc
atcatcgtactggatgaggctcacaacgtggaagatacgtgtcgatcgagtgccagtgtg
gaggtgactactgacgctctggcagcgtcgatcaaggctttcacgatcgtcatcaagcat
ggcaaccgaccaaagacgtacaacgcgctgctgaagttgctgaatgggatcaaccgctgg
ctgcagagtgtggactcgaatgccaacgctattcttcagccgtccgggtatgaagagaag
agtaaagtctgggacggcgcagatgctctagccatgctggccgagtattctggactgacc
aaagacaaccttgaagagatgaaagagaacgttcaagaagtgcgagagtacgaaaacggg
ctggggaacagcgcagagtccagccaacagcctccaactcaagcagcacaagatgcagct
gcaaatccgacgggtgcctcagttctgctaggtgcgttggctttggctacggtggagagc
atcatgaacgtggtcgactacatgtttcgcgacaggctcaagttcattgaggactttaaa
ctggtggtgatcaaatccaagtcgacgtggaaggagaacgcgagcttccgatctcccaca
aagaggaacgggggcgacgaatgggagctgaaaatgtgcatctggtgtctgaatgccgct
gtggccttctcggatattgcgagtcaggcccgcagcgtcattctgacgtcgggtacgctg
agtcccatggaatcttttgccggtgagttgggcgtggacttccccattcgccttgaggcc
aatcacgtcgtgaacatgcgcaaacaagtgtttattggcgcggtcatgcatggcccaggc
aacgtcgacttgcagtccacttacaacaaccagcaggatcctaggtatcaagactcgatg
ggccagctgctactgcaatactcgcaagcgatcccaggtggaattctcatgttcttcccg
tcgtattcgctgctgaataaactcacgacacgctggaaaaagaccaaactatggggcgag
atcgagcagttcaaggcaatctactccgaaccccgaaatgctggcaaagactttgacagg
ctactggaagattacaaagaaaccatcacatgctccaaggatggcgacgacggcaacaag
actggtgccgtctttttggcggtttatcgcggcaaagtgagcgagggcattgatttctcc
aatgacaacgctcgagctgtgctttgtgtgggaattcccttccctagtgtcaaggagctg
caggtttctctgaagcgcaagtatcaagacgagaagagccgcatgaacatgaagcttgtg
aatggccacatctggtacaacctgcaggcgttccgcgctctcaaccaagctcttgggcgt
tgtattcgtcatcgtcaagattacggcgccattatgctgctggattcaagacatcgcttc
aataagcacaccaagtctctttccaagtggatgcgaccatacattcaggagttcgagcac
tcgcagatgtgcgttccgatgttcagcgatttttttcagcggaacaagatggagttgcct
caagtggtgtcagtgccttcagtagacacggctggatcggctgcatcggagtggaagtcg
aagcgagcgcctcttgttctcgaatacgaggcaggcaagaacggcaacaaggggaagaag
gtcaccatcgcccaggagaaacgcatggctgcaccgtcattgtcgtctacgctgaccaca
gtgaaggactttatggccaaacagaaccaggaatcggatccacaagaaagcgtattctca
attttccgcccgcaaccttcaaagtaa
DBGET
integrated database retrieval system
