Phytophthora infestans: PITG_18478
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Entry
PITG_18478 CDS
T01333
Name
(RefSeq) polysaccharide lyase, putative
KO
K22539
pectate lyase [EC:
4.2.2.2
]
Organism
pif
Phytophthora infestans
Pathway
pif00040
Pentose and glucuronate interconversions
pif01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
PITG_18478
Enzymes [BR:
pif01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
PITG_18478
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase
DTW
Motif
Other DBs
NCBI-GeneID:
9462725
NCBI-ProteinID:
XP_002997603
UniProt:
D0NYD3
LinkDB
All DBs
AA seq
441 aa
AA seq
DB search
MKTFERSDVSCEGQSESGADTAVFNVEAGGHLKNVIIGKNQMEGVHCDKHDCIIENVWWD
DVCEDALSVKGGTASSVTKVIGGGARYADDKVIQHNGFGTVDIDGFYGEDISKLYRSCGT
CGNRPKKVSVSNTYVLNPTNAIVTVNKNWGDQATLRNVWVKSSKPTVKVCQWSQGNANGE
PKMLGHGPSNPLCKYSESDVHINEDISEAATTPSRQDTTASVPDGTWPASTGIVRYKKPY
TIKAGEVFDGKMQTFERSDITCSGWRHSEERHHRQEPEGDVHCDYHDCTIESVWWDDVCE
DALSIKGGSASSVTTVTNCGARFAEDKVVQHNGYGTVKIKDFFAQEFGKLYRSCGTCGNI
PRKVTVENVYALDPLVSVVTVNKNNNDQATLKNIFVKTTDGKKNVKVCQWSQASKTPSNV
GDGPSGKLCQYSTSDVHINED
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgttcgagcgctccgacgtgtcgtgcgagggccaatccgaaagcggggcggac
acggccgtgttcaacgtcgaggccggcggccacctcaagaatgtcatcatcggcaagaac
caaatggagggcgtgcactgcgacaagcacgactgcattatcgagaacgtgtggtgggat
gacgtgtgcgaggacgccctcagtgtcaagggcggaacggcgtccagcgtgaccaaggtc
atcggtggcggggcccggtacgccgacgacaaggtcatccagcacaacggcttcggtacg
gtcgacatcgacggcttctacggcgaggacatcagcaagctctaccgttcgtgcggcact
tgtggcaacagacccaagaaggtgtccgtgtccaacacgtacgtcctcaacccgaccaac
gccatcgtgacggtcaacaagaactggggcgaccaggccacactccgcaacgtctgggtc
aagtcgagcaagcccaccgtcaaggtgtgccagtggtcgcagggtaacgccaacggtgag
cccaagatgctgggccacggtccgtccaaccctctgtgcaagtactcggagagcgacgtg
cacatcaatgaggacatttccgaggcagccacgactccttcacgtcaggacacgacggct
tccgtcccggacggcacgtggccggccagcacgggcatcgtccgttacaagaagccgtac
acgatcaaggccggtgaggtgttcgatggcaagatgcagaccttcgagcgctcggacatc
acgtgctcgggctggcggcactctgaagaacgccatcatcggcaagaaccagaaggagac
gtgcactgcgactaccacgactgcaccattgagagcgtgtggtgggatgacgtgtgcgag
gacgcgctgagcatcaagggtggctcggcgtccagcgtgacgaccgtgaccaactgcggc
gctcgcttcgccgaggacaaggtggtgcagcacaacggctacggcaccgtcaagatcaag
gatttcttcgcgcaggagttcggcaagctctaccgttcgtgcggcacgtgcggcaacatt
ccccgtaaggtgacggtggagaacgtgtacgccctcgacccgctcgtgagcgtcgtcact
gtcaacaagaacaacaacgaccaggccacgctcaagaacatcttcgtcaagacgacggac
ggcaagaagaacgtcaaggtgtgtcagtggtcgcaggccagcaagacgccgtcgaacgtg
ggcgacggtccgtcgggcaagctttgccagtactcgacgagtgatgtgcacatcaacgag
gattga
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