Phytophthora infestans: PITG_18912 Help Entry PITG_18912        CDS       T01333                                  Name (RefSeq) nonsense transcript regulator   KO K14326   regulator of nonsense transcripts 1 [EC:5.6.2.5 5.6.2.3] Organism pif  Phytophthora infestans Pathway pif03013   Nucleocytoplasmic transport pif03015   mRNA surveillance pathway Brite KEGG Orthology (KO) [BR:pif00001]  09120 Genetic Information Processing   09122 Translation    03013 Nucleocytoplasmic transport     PITG_18912    03015 mRNA surveillance pathway     PITG_18912  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pif03019]     PITG_18912 Enzymes [BR:pif01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.3  DNA 5'-3' helicase      PITG_18912     5.6.2.5  RNA 5'-3' helicase      PITG_18912 Messenger RNA biogenesis [BR:pif03019]  Eukaryotic type   mRNA surveillance and transport factors    Surveillance factors     Surveillance complex      PITG_18912    mRNA cycle factors     Common to processing body (P body) and stress granule      PITG_18912 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  AAA_12 AAA_11 AAA_30 AAA_19 UPF1_1B_dom SLFN-g3_helicase ResIII UvrD-helicase DEAD NAT10_TcmA_helicase NPHP3_N nSTAND3 AAA_25 AAA_16 Ribosomal_S13_N AAA_5 PhoH ATPase AAA AAA_22 AAA_7 Motif Other DBs NCBI-GeneID:  9473638 NCBI-ProteinID:  XP_002997185 UniProt:  D0NZQ9 LinkDB All DBs AA seq 687 aa AA seqDB search MLYGKDWEGTGHVLRLEESEVALEMRSSNVPIEITDGYLVDFVWKSTSFDRMQAAMKTFA VDDTSLTGYLYHKILGHDVGVQALRIPRSVGTHFSAPGLPELNTFQMEAVKGVLEQPLSL IQGPPGTGKTVTSASIVFHMSKQNMGQVLVTAPSNIAVDHLTMKISATGLRVVRLAAKSR EAVASSVEHLSLHAMIKSLDSPDKADLRKLMQLKDDIGELSSQDEKRFKSLKRQAEREIL QAADVICTTCVGAGDPRLSNFRFRQVLIDEATQATEPECLIPIVQGAKHVVMVGDHRQLG PVVMNKKAAKAGLNNSLFDRLVKSDTKHRPFRLRVQYRMHPFLSEFPSNEFYEGDLQNGV AASERQLSSVDFPWPNPNKPTFFYICLGAEEISSSGTSYLNRTEASNVEKIVTTFLKAGV LPSQIGVITPYEGQRAYVVSYMQRNGPLRSQLYKDVEVASVDSFQGREKDLIILSCVRSN ENQGIGFLSDERRLNVALTRAKYGVILLGNPRVLAKQTLWNKLLNHYRDNQLIMEGPLNN LTPSHMQFPVQRHSERGARREGNGFNRRGPAPPLDSRFDPRYEQTGGLPLDPLAAGGLPP PAPQRGPRRGPSSYVPGSMGPLTQDGMTQSSMGMDGPFTQMAQTQSFSQLSSDKFAMSQD SFGYEHDFKSQNMPMSQDARAPGSDFY NT seq 2064 nt NT seq  +upstreamnt  +downstreamnt atgttgtacggcaaagactgggaaggcacgggccatgtgctgagactggaggagtccgaa gtggcgctggagatgcggagcagcaacgtgcccatcgagatcacggacggatacctggtg gactttgtgtggaaatccacgtcgtttgaccgcatgcaggcggcgatgaagacgttcgca gtggacgacacgtcgctgacgggctatctgtaccacaagatcttgggccatgacgttgga gtgcaggctttgcgcatccctcgctcggtgggcacccacttctcagcacctggcctcccc gagttgaacacgttccagatggaagcagtgaagggcgtgctggagcagccgctgagtttg atccaagggcctccgggcacgggcaagacggtcacgtcggcgtcgattgtgttccacatg tcgaagcagaacatgggccaagtgctcgtcaccgcgcccagtaacatcgcggtggatcat ttgaccatgaagatcagtgccacgggtcttcgagtggtgcgtctggctgccaagagtcga gaggcggtggcttcttcggtcgaacacttgtcgctccatgccatgatcaagtctctggac tcgccggataaggcggatctacgcaagctcatgcagctgaaggacgacatcggcgagttg tcgtctcaagacgagaagcgcttcaagtctctgaagcggcaggcagagcgcgagatcctg caagcggctgacgtcatctgtaccacgtgtgtgggggcaggagacccgcgtctgtcgaac ttccgcttccgccaagtcttgatcgatgaggccactcaagccaccgaacccgagtgtctg atccccatagttcaaggagccaaacacgtggtgatggtgggcgaccaccgtcagttgggg cccgtggtgatgaacaagaaggcggcaaaagcaggcctgaacaactcgctgttcgatcga ctggtgaagagcgacacaaagcaccgcccgttccgtctacgagtgcagtaccgtatgcat ccgttcctgtccgagttcccgtccaacgagttctacgaaggcgatctacagaacggcgtg gctgcgagtgagcgccagctctcgagtgtggacttcccgtggccgaacccgaacaaaccg acgttcttctacatttgtctgggcgccgaagagatcagctcctcgggcaccagctacttg aaccgcacagaggcgagcaacgtggagaagatcgtcacgacgttcctgaaagcaggtgtg ctgccctcgcagatcggagtcattacgccgtacgaaggccaacgcgcgtatgtggtcagc tacatgcagcgcaatgggccgctgcgctcccagctgtacaaggacgtggaagtggcgagc gtggactcgttccaaggtcgagagaaggacctgatcatcctttcttgcgtgcggtcgaac gagaaccagggcatcggcttcttgagcgacgagcggcgtctgaatgtggccctcacacgc gccaagtatggcgtcattctactgggaaacccacgggtgctggccaagcagacgctctgg aacaagctgctgaaccattaccgagacaaccagctaatcatggaaggcccgctgaacaat ctgacgccttcgcacatgcagtttcctgtccagagacactcggaacgtggcgctcgacgt gaaggtaacgggtttaatcgccgtggaccggctcctccgttggactcgcgctttgaccct cgctacgagcagactgggggtcttcctctggatccgcttgctgctggaggtcttcctccg cctgcgccgcagcgtggccctcgtcgtggaccgagtagttatgtgcctgggagtatggga ccgctgacgcaggacgggatgacgcagtcctcgatggggatggacgggccgttcacgcag atggcgcagacgcagtctttcagtcaactctcgagcgacaagttcgcgatgtcccaggac agcttcggatacgaacacgacttcaagtcgcagaacatgcccatgtcgcaagatgctcgt gcgcctggcagcgacttttactaa

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