KEGG   Phytophthora infestans: PITG_21175
Entry
PITG_21175        CDS       T01333                                 
Name
(RefSeq) hypothetical protein
  KO
K14962  COMPASS component SWD2
Organism
pif  Phytophthora infestans
Pathway
pif03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:pif00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    PITG_21175
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pif03019]
    PITG_21175
   03036 Chromosome and associated proteins [BR:pif03036]
    PITG_21175
Messenger RNA biogenesis [BR:pif03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     PITG_21175
Chromosome and associated proteins [BR:pif03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     PITG_21175
    COMPASS/SET1 complex (yeast)
     PITG_21175
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 WDR55 ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd EIF3I Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_SPT8
Other DBs
NCBI-GeneID: 9466892
NCBI-ProteinID: XP_002895267
UniProt: D0P358
LinkDB
AA seq 165 aa
MADGGVELTDAVLRSFSVARNFAPQEDEDPNVQITSLDFHRNGERCVTSRRDGVMSMINC
LSGTVAKTILTKRYGVGIVRFTHHLDCVIFSSANTANDHRIRYHSFFDNKFLRYYTGHTD
SRMMAGVTSLMMHPTADQFLSAGMDGTIRLWDIRHSDTTVRAWVT
NT seq 498 nt   +upstreamnt  +downstreamnt
atggcagacggaggagtggagctgaccgatgccgtgttgcgctccttcagcgtcgctcgc
aactttgccccgcaggaggatgaagatccgaacgttcagatcacgtcgctggacttccac
cgcaacggcgagcggtgcgtcacgagtcgcagagatggtgttatgtccatgattaactgc
ttgagtggaactgttgccaagacgatcttgacgaagcgatacggcgtaggcattgtgagg
tttacccatcacctggactgtgtgatcttctcatcggctaacactgcgaatgatcaccgc
attcggtatcattcgttcttcgacaacaagtttcttcgctactacactggccacaccgat
agtcgaatgatggcaggggtcacgtcgctgatgatgcaccccactgcagaccaattcctc
tccgctggaatggacggtacgattcgactctgggatatccgccattcagatacaacggtg
cgggcatgggttacttga

DBGET integrated database retrieval system