Phytophthora infestans: PITG_21176
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Entry
PITG_21176 CDS
T01333
Name
(RefSeq) transportin-like protein
KO
K18752
transportin-1
Organism
pif
Phytophthora infestans
Pathway
pif03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pif00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PITG_21176
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pif03019
]
PITG_21176
03009 Ribosome biogenesis [BR:
pif03009
]
PITG_21176
Messenger RNA biogenesis [BR:
pif03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
PITG_21176
Ribosome biogenesis [BR:
pif03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PITG_21176
Pre-60S particles
PITG_21176
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
TPR_IMB1
TPR_DNAAF5
HEAT_GCN1
TOR1L1_N
HEAT_2
TPR_IPO5
Vac14_Fab1_bd
HEAT_EF3_N
IBN_N
MMS19_C
HEAT_MROH2B_C
Cnd1
PIK3R4-like_middle
Adaptin_N
UME
HEAT_GCN1_C
PDS5
ANAPC15
TPR_TTI1_N
Motif
Other DBs
NCBI-GeneID:
9466893
NCBI-ProteinID:
XP_002895268
UniProt:
D0P359
LinkDB
All DBs
AA seq
903 aa
AA seq
DB search
MSDTWQPQPALLNEVVALLQAYMVPNNQVQRESYQRLQQFQKNLEFNLYLVHLLCSAQAE
PNVRQLAGLLLKRNIKARDASAVLTPTEAEILAVIRAQTLRILADPLSPIRNAAGSIVTT
FVSQYTFLDEWPELMPALHALLEQQDENALAGAFGALVKICEDSAAKLENSPSRPLNVLV
PKLLQYFHHQNANFRRDALECLNNVLIYMPVGLVVQMENFLAGISLLTQDPSNDVRRLVC
KSIVILLEVGVQYLVPHLDSIIQFILRANQDEDENVALEACEFWASFCDLREFNDIKPML
QPYLAQIVPLLFQRMVYSEEDLANFEAEEQNQNENVPDRPEDIKPIFHRKAGGGHEGGGL
DDDDDDEDDDYDDDDDDSMLEWNLRRCSAASLDNLANGYGNDILPTLLPLLQERLAQEQP
WPLVESGILALGAIADGCYNGITPHLPQLYPFLLQKLEDPAPLIRSITCWTLSRYATWVV
EQGNHEMLFKPLVEGMLKRILDPHKKVQEAACSAFCTLEEEAREELVPYLTPILQNLMFA
FGKYQAKNLLILYDAIGTLADSIGEHLNHLELIKILMPPLIAKWNALEDRSREILPLFEC
LAPVAQALGNGFQEFAMNVYVRCQRIVENELLADAMSEQSPNEFDEGDPELIVCALDLIS
GMIEGLQNNSEALLNGSNILNVLMSCVRHDVMDVRQSAMGVVGDLAKHAPNILRPSLGDL
LPVLIENIDPDLATVCNNASWSVGEIAIRIGAEMEPYVENCLGRLISMINRPKLPRNLVE
NCAITIGRLGYVCPNVVAPHLHEFAKRWCRALAHVRAPEEKEHCFLGLCYMVKANPNGIV
ADFMFMCGAIASLEGQQIQNAELKDMLYQIVHGFKSSLGENWAAYFASFPEPLRQFLTTR
FNL
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatacgtggcagccacagcctgcgctacttaatgaggtggtggcgctcctacag
gcctacatggtgcccaacaaccaggtgcagcgcgagtcctaccagcgtctgcagcagttc
cagaagaaccttgagtttaatctctacctggttcatttgctctgctccgcacaagccgag
cccaacgtgcgccagctggccggacttctgctcaagcgtaatatcaaggcccgcgacgcc
agcgctgtgctcacccccaccgaggccgaaatcctcgccgttatccgcgcgcagacgttg
cgaattctggccgacccgctgtctcccatccgcaacgcggccggctccatcgtcaccact
tttgtgtcccaatacactttcctagacgagtggcccgagctcatgcccgcgctacatgcg
cttctggagcagcaggacgagaacgccttggctggagctttcggtgcgcttgtcaagatc
tgcgaggactcggcggccaagctcgagaattcgcctagccgcccactcaacgtgctggtg
cccaagctgcttcagtatttccaccaccagaatgccaactttcgtcgtgacgcgctggag
tgtctcaacaacgtgctgatctacatgcccgtgggccttgtggtgcagatggagaacttc
ctggccgggatctcactgctcactcaggacccgtccaacgacgtacgtaggctcgtgtgc
aagagtatcgtcatcttgctggaggtgggcgtgcagtatctcgtgccccaccttgacagc
atcatccagttcatcctgcgggccaaccaggacgaggacgagaacgtagccctcgaggcg
tgcgagttctgggcatctttctgcgatctgcgtgagttcaacgacattaaacccatgttg
cagccgtatctggcccagattgtgccgctgttgtttcagcgcatggtgtacagtgaggaa
gacttggccaacttcgaggcagaggaacagaaccagaatgagaacgtgcccgaccgacct
gaggacatcaagcccatttttcatcgcaaggccggcggtggccacgaaggaggcggcctc
gatgacgacgatgacgatgaggacgacgattatgacgatgacgatgacgactcgatgctg
gagtggaacttgcgtcgttgctcggccgcaagtctcgacaacctggccaatggctacggg
aatgacattcttccgacactgttgcctctactgcaggagcgtttggcacaggagcagcca
tggccacttgtggagagcggcatcttggcgcttggagctatcgccgatggttgctacaac
ggtatcactcctcacctgccacaattatacccgttcctactgcagaaactagaggacccc
gccccgcttatccgtagtatcacgtgctggacgctgagtcgctacgctacgtgggtcgtt
gaacagggcaaccacgaaatgctgtttaagcctcttgtggagggtatgttgaagcgcatt
ctcgacccacacaagaaggtgcaggaggcagcatgctctgcgttctgcacgctagaagag
gaagctcgcgaggagctggtgccgtacctgacgcctattctacagaacctcatgtttgct
ttcggcaagtaccaggctaaaaacctgctgatcttgtacgacgccatcggaacgcttgca
gactcgatcggtgaacatctgaaccacttggagctgatcaagatcctcatgcctccgctt
attgccaagtggaacgccctggaagaccgcagtcgcgagatcctcccgctgtttgagtgc
ttggcgcccgtggctcaggcactgggcaacggcttccaggagttcgccatgaacgtgtac
gttcgttgtcagcgtatcgtggagaatgagctgttagccgacgccatgtcggagcaaagt
cccaacgagttcgacgagggcgacccggagctcattgtgtgcgctctggatctgatctcg
ggcatgatcgaaggtctgcagaacaacagcgaggcgctgttgaatggctccaatatcctg
aatgtgcttatgagctgcgtgcgtcacgacgtgatggacgtgcgacaaagtgccatgggc
gtagtgggcgacctggccaagcacgcgccgaacattctccgtcccagtcttggagatctg
ctgccggtgttgatcgagaacatcgatccggaccttgctactgtatgcaacaacgccagc
tggtcggtgggcgagatcgctattcgcatcggagccgagatggagccgtacgtcgagaac
tgcttgggccgcttgatcagcatgatcaaccgccccaagctgcctcgtaacttggtggag
aactgcgcgatcacgatcggccgactcggatacgtgtgcccgaacgtggtggcgccccac
ttgcatgagttcgcgaagcgctggtgccgcgctctcgctcacgtccgcgcaccagaggag
aaggagcactgcttcttaggcctgtgctacatggtcaaggcgaacccgaacggcatcgtc
gctgactttatgttcatgtgtggtgccatcgcttctcttgaaggtcagcagatccagaac
gcggaactgaaggatatgttgtaccagatcgtgcacggcttcaagtcgagtctgggcgag
aactgggccgcgtactttgcgagcttcccggagcctttacgacagttcctaaccactcgc
ttcaacttgtag
DBGET
integrated database retrieval system
