Pigmentiphaga sp. H8: EGT29_03065
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Entry
EGT29_03065 CDS
T05719
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pig
Pigmentiphaga sp. H8
Pathway
pig03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EGT29_03065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pig03021
]
EGT29_03065
03400 DNA repair and recombination proteins [BR:
pig03400
]
EGT29_03065
Enzymes [BR:
pig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EGT29_03065
Transcription machinery [BR:
pig03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EGT29_03065
DNA repair and recombination proteins [BR:
pig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EGT29_03065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
AAA_lid_4
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
AZG06926
UniProt:
A0A3G8GFJ8
LinkDB
All DBs
Position
619549..620535
Genome browser
AA seq
328 aa
AA seq
DB search
MANAAFLKPRNIDVETIGSNHAKVIMEPFERGYGHTLGNALRRILLSSMAGYAPTEVQIT
GVVHEYSAIDGVREDVVDILLNLKGVVFKLHNRDEVVLTLRKQGPGVVTAADIELSHDVE
IINPNHVIANLTDNGRLEMQLKVEKGRGYVPGNLRSFADDHARTVGRIVLDASYSPIRRV
SYTVESARVEQRTDLDKLVLDIETNGVISPEEAVRQSARILMDQLSVFAALEGSTETIEA
PARGTPQIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKSLN
EIKEVLAARGLTLGMKLENWPPLGLERP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggcgaatgccgcatttctgaaaccgcgcaatatcgacgtcgagaccatcggctcgaat
catgccaaggtgatcatggagccgttcgaacgcggctacggtcataccctgggcaatgcg
ctgcgccgcatcctgctgtcgtcgatggcgggctacgcgccgaccgaagtgcagatcacc
ggtgtcgtgcacgaatactcggccatcgatggcgtgcgcgaagacgtggtcgacatcctg
ctgaacctcaagggtgtggtgttcaagctgcacaaccgcgacgaagtcgtcctgaccctg
cgcaagcaaggccccggcgtggtcacggccgccgatatcgaactctcgcacgacgtcgag
atcatcaaccccaaccacgtcattgccaacctgacggacaacggccgtctggaaatgcaa
ctgaaggtggagaagggccgcggctacgtgccgggcaacctgcgcagcttcgccgatgac
catgcccgcaccgtgggccgcatcgtgctggacgcctcgtacagcccgatccgccgcgtc
agctacaccgtcgaaagcgcccgcgtcgagcagcgtaccgacctggacaagctggtcctc
gacatcgagaccaacggcgtgatctcgcccgaggaagccgtgcgccagtcggcccgcatc
ctgatggaccagctgtcggtgttcgccgcgctggaaggctcgacggaaaccatcgaagcg
cccgcccgtggcacgccgcagatcgacccgatcctgctgcgcccggtcgacgacctcgaa
ctgaccgtccgctcggccaactgcctgaaggccgagaacatctactacatcggcgacctg
atccagcgtaccgagaacgaactgctgaagaccccgaacctgggtcgcaagtcgctcaac
gagatcaaggaagtcctggctgcccgcggcctgaccctgggcatgaagctcgagaactgg
ccgcctctcggcctcgagcggccgtag
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