Pigmentiphaga sp. H8: EGT29_08765
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Entry
EGT29_08765 CDS
T05719
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
pig
Pigmentiphaga sp. H8
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pig03032
]
EGT29_08765
03036 Chromosome and associated proteins [BR:
pig03036
]
EGT29_08765
03400 DNA repair and recombination proteins [BR:
pig03400
]
EGT29_08765
DNA replication proteins [BR:
pig03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EGT29_08765
Chromosome and associated proteins [BR:
pig03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EGT29_08765
DNA repair and recombination proteins [BR:
pig03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EGT29_08765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
TetR_C_30
Motif
Other DBs
NCBI-ProteinID:
AZG07961
LinkDB
All DBs
Position
1855793..1856095
Genome browser
AA seq
100 aa
AA seq
DB search
MTKSELIARLAARYPQLVAKDADYAVKTILDAMAQSLSEGQRIEIRGFGSFSLSKRPPRI
GRNPKSGEKVLVPEKRVPHFKAGKELRERVDAPVQKPSGN
NT seq
303 nt
NT seq
+upstream
nt +downstream
nt
atgacgaagtccgagttgatcgcccgattggccgcccggtatccgcagctggtcgccaag
gacgccgattacgccgtcaagaccatcctcgatgcgatggctcagtccctctcggaaggg
cagcgcatcgagatccgtggtttcggcagtttttcgttgtccaaacgtccgccgcgtatc
gggcgcaatcccaagtccggtgaaaaggtgctggttcccgaaaaacgggtcccgcacttc
aaggccggcaaggagttgcgcgagcgggtcgacgcccccgtgcaaaagccttccgggaac
tga
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integrated database retrieval system
