Pigmentiphaga sp. H8: EGT29_08785
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Entry
EGT29_08785 CDS
T05719
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
pig
Pigmentiphaga sp. H8
Pathway
pig00541
Biosynthesis of various nucleotide sugars
pig01100
Metabolic pathways
pig01250
Biosynthesis of nucleotide sugars
Module
pig_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
EGT29_08785 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
pig01005
]
EGT29_08785 (rfaD)
Enzymes [BR:
pig01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
EGT29_08785 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
pig01005
]
Core region
EGT29_08785 (rfaD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Se-cys_synth_N
Motif
Other DBs
NCBI-ProteinID:
AZG07964
UniProt:
A0A3G8GIV1
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All DBs
Position
1859110..1860099
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AA seq
329 aa
AA seq
DB search
MIIVTGAAGFIGSNLVKGLNARGERDIIAVDDLLEGDKFVNLVDGEIADYLDKNDFRRRV
ADGSLPKVDAILHQGACSDTTERNGQYMMDNNYRVTLELFEYAQRERIPFLYASSAAVYG
AGPVYAEDLRNEKPLNVYGYSKFLFDQVLRRRLGALTAPVVGLRYFNVYGPREQHKGRMA
SVAFHNMNQFLKEGHVRLFGGWDGYGDGQQQRDFISVHDVVEVNLHFLGRPVSGVYNCGT
GRAQPFNDVAAAVVNTLREERGEAPLALADLAAQGLLRYIEFPEDLKGRYQSYTQADTTQ
LRAAGFTAPMRDVQTGVSEYIRELRGMSK
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgtaacgggagccgccggcttcatcggcagcaatctggtcaagggcctgaac
gcccgcggcgagcgcgacatcatcgcggtcgacgatttgctcgaaggcgacaagttcgtg
aacctggtcgacggcgagatcgccgactacctggacaagaacgatttccgccgccgcgtg
gcggacggatccctgcccaaggtggacgccatcctgcaccagggcgcgtgctcggacacg
accgaacgcaacggccagtacatgatggacaacaactaccgcgtcacgctggagcttttc
gagtatgcccagcgcgaacggattcccttcctgtatgcctcgtcggccgccgtgtacggc
gcgggcccggtctatgccgaggacctgcgcaacgagaagccgctgaacgtctacggctat
tccaagttcctgttcgatcaggtgctgcgccgccgcctgggcgcgctgaccgcgccggtg
gtggggctgcgctatttcaacgtctatggcccgcgcgagcagcacaagggcaggatggcc
tcggtcgccttccacaacatgaaccagttcctgaaggaaggccacgtgcgcctgtttggc
ggctgggacggctatggcgacggacagcagcagcgggacttcatctcggtccatgacgtc
gtggaagtgaacctgcatttcctggggcgtccggtgtcgggcgtctacaactgcggcacc
ggccgggcccagcctttcaacgacgtggcggccgcggtggtcaacacgctgcgcgaggag
cgcggcgaggcgcccctggcgctggccgacctggcggcgcaggggctgctgcgctacatc
gagttccccgaggacctcaagggccgctaccagagctacacccaggccgacaccacgcag
ttgcgcgcggccggtttcaccgcgccgatgcgggacgtgcagaccggcgtttccgagtac
atccgggaactgcgcggcatgtcgaagtag
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