Pigmentiphaga sp. H8: EGT29_12675
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Entry
EGT29_12675 CDS
T05719
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
pig
Pigmentiphaga sp. H8
Pathway
pig03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EGT29_12675 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pig03400
]
EGT29_12675 (uvrB)
DNA repair and recombination proteins [BR:
pig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EGT29_12675 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EGT29_12675 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
Kinesin
DUF87
Motif
Other DBs
NCBI-ProteinID:
AZG08645
LinkDB
All DBs
Position
2662812..2664971
Genome browser
AA seq
719 aa
AA seq
DB search
MQTTPSEGLHEGLHDAAGLVAAAADAQGFEPRFVTYDGSPFQLYQPYPPAGDQPTAIGQL
CEGIEDGLMYQTLLGVTGSGKTYTMANVIARMGRPAIVLAPNKTLAAQLYAEMREFFPRN
AIEYFVSYYDYYQPEAYVPTRDLFIEKDSSINEHIEQMRLSATKSLLERRDTIIVASVSC
IYGIGNPDDYHDMVMMLRTGDRVGQRDIIARLVAMQYTRNDTEFMRGTFRVRGELIDVFP
AEHAELALRITLFDDEVETLELFDPLTGKVRQKVLRFAVYPGSHYVTPRATVLRAIDTIK
QELRERSRHFVDNGQLVEAQRLEQRTRFDLEMLQELGFCKGIENYSRHLSGAKPGDPPPT
LVDYLPHDALMIIDESHVTVGQIGAMYKGDRSRKETLVNYGFRLPSAMDNRPLKFEEFES
KMRQTIFVSATPADYEKTHADAVVEQVVRPTGLVDPVVEIRPALNQVDDVLGEIHERVAR
NDRVLITTLTKRMAEDLTDFLTDHGVKVRYLHSDIDTVERVEILRDLRLGTFDVLVGINL
LREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLNGKAILYADRMTDSMRRAL
DETTRRREKQLLFNEERGIVPQGVKKEVRDLIDGVYAPSDGMDGGDSLEAARFEAMGEKQ
IAREIKKLEKAMLEYARNLEFEKAAQARDQLLALKQKVFGAGGQQADEDALNATGPTRG
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgcagactacgccttccgaagggttgcacgaagggttgcacgacgccgccggcctggtg
gcggccgcggccgacgcgcaagggttcgagccccgtttcgtcacctacgacggcagtccg
ttccagctctaccagccttatccgcccgccggcgaccagccgaccgccatcgggcagttg
tgcgaaggcatcgaagacggcctgatgtaccagaccctgctgggcgtgaccggctcgggc
aagacctacaccatggccaacgtgatcgcccgcatgggccggccggccatcgtgctggcg
cccaacaagaccctggccgcccagctttatgccgagatgcgggagttcttcccgcgcaac
gcgatcgagtacttcgtctcgtactacgactattaccagcccgaagcctacgtgccgacg
cgcgatctcttcatcgagaaggactcgtccatcaacgagcacatcgagcagatgcgcctg
tcggccaccaagagcctgctggaacgccgcgacaccatcatcgtggccagcgtctcgtgt
atctacggtatcggcaaccccgacgactaccacgacatggtgatgatgctgcgcaccggc
gaccgcgtcgggcagcgcgacatcatcgcccgcctggtggccatgcaatacacgcgcaac
gacacggagttcatgcgcggcacgttccgggtccggggggaactgatcgatgtcttcccg
gccgagcatgccgaactggccctgcgcatcacgctgttcgacgacgaggtcgagacgctg
gaactgttcgatccgctgaccggcaaggtgcggcagaaggtgctgcggttcgcggtctac
ccgggttcgcactacgtgacgccgcgcgccaccgtgctgcgcgcgatcgacaccatcaag
caggagctgcgcgagcgctcccgccacttcgtcgacaacggccagctggtcgaggcccag
cgcctggagcagcgcacccgcttcgacctcgaaatgctgcaggaactggggttttgcaag
ggcatcgagaactactcgcgccacctgtccggcgccaagccgggcgatccgccgccgacg
ctggtggactacctgccgcacgacgccctgatgatcatcgacgaaagccacgtcacggtg
gggcagatcggcgccatgtacaagggcgaccgctcgcgcaaggaaaccctggtgaactat
gggtttcgcctgccgtccgcgatggacaaccggccgctgaagttcgaggaattcgagtcc
aagatgcgccagaccatcttcgtctcggccaccccggcggactatgaaaagacgcatgcc
gatgccgtggtcgagcaggtggtgcggccgaccggcctggtcgatccggtggtcgagatc
cggcccgcgctgaaccaggtggacgacgtgctgggcgagatccacgagcgggtggcgcgc
aacgaccgcgtgctgatcaccacgctgaccaagcgcatggccgaggacctgacggacttc
ctgaccgaccatggggtgaaggtgcgctacctgcactcggacatcgatacggtcgagcgc
gtggaaatcctgcgcgacctgcgcctgggcacgttcgacgtgctggtcggcatcaacctg
ctgcgcgaggggctggacattcccgaggtgtcgctggtggccatcctggacgcggacaag
gaaggcttcctgcggtccgagcgcagcctgatccagaccatagggcgggcggcgcgcaat
ctgaacggcaaggccatcctgtatgccgaccgaatgaccgactcgatgcggcgcgcgctg
gacgaaaccacccgccgccgcgagaaacagttgctcttcaacgaggaacggggcatcgtc
ccgcaaggggtcaagaaggaagtacgcgacctgatcgatggcgtctatgcgccttcggac
gggatggacggcggcgactcgctcgaggcagcccgtttcgaggccatgggcgagaagcag
atcgccagggagatcaagaaactggagaaggccatgctggagtacgcccgcaacctggag
ttcgaaaaggcggcgcaggcccgcgaccagttgctggcgctcaagcagaaagtgttcggg
gcgggcgggcagcaggccgacgaggatgcgctgaacgcgaccgggccgacgcgaggatga
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