KEGG   Pigmentiphaga sp. H8: EGT29_12905
Entry
EGT29_12905       CDS       T05719                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
pig  Pigmentiphaga sp. H8
Pathway
pig03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pig00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    EGT29_12905
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pig03400]
    EGT29_12905
DNA repair and recombination proteins [BR:pig03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     EGT29_12905
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AZG08691
LinkDB
Position
complement(2709030..2709896)
AA seq 288 aa
MATTARTLWKGAISFGLVHIPVALYTATQENDLDFDWLDKRSMDPVGYKRVNKRTGREIA
RENIVKGIAYEDGRYVVLSDDEIRAAYPESTQTIEIETFVAADAIPFIYLERPYYLAPLG
KGAKVYALLREALFKTGRIGVARVVIQTKQHLAALIPAGPGLVLNLLRWGDEIRSWENLD
LPEEGSHAEGISAREIKMAVQLIEDMAGDWDPQQFHDEFKEKILQLVQTKIEADETQAVT
SIESMEEARPTADIVDLTELLKRSLDKHKGGTGAGGGHGRGGKSRRSA
NT seq 867 nt   +upstreamnt  +downstreamnt
atggccaccacggcacgcacactctggaaaggcgccatcagtttcggcctggtccacatt
ccggtggcgctgtacaccgccacccaggaaaacgacctggacttcgactggctggacaag
cgcagcatggacccggtgggctacaagcgcgtcaacaagcgcaccggccgcgagatcgcg
cgcgagaacatcgtcaagggcatcgcttatgaagacggccgctacgtcgtgctgtccgac
gacgagatccgcgccgcctatcccgagtccacgcaaaccatagagatcgagaccttcgtg
gcggccgacgccattccgttcatctatctcgaacgcccctattacctggcacccctgggc
aagggtgccaaggtctacgcgctgctgcgcgaggcgctgttcaagaccgggcggataggc
gtggcgcgcgtggtcatccagaccaagcagcacctggccgcgctgattcccgccgggccc
ggcctggtcctgaacctgctgcgctggggcgacgagatccggtcgtgggaaaacctcgac
ctgcccgaggaaggcagccacgccgaaggcatctcggcgcgcgagatcaagatggccgtc
cagttgatcgaggacatggcgggcgattgggatccgcagcagttccacgacgagttcaag
gagaagatcctgcaactggtgcagaccaagatcgaagccgatgaaacccaggccgtcacc
tccatcgagtccatggaggaagcccgccccaccgccgacatcgtggatctgacggaactg
ctcaagcgcagcctggacaagcacaagggcggcacgggcgccggcggcgggcacggccgc
ggcggcaagtcccggcgcagcgcctga

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