KEGG   Pigmentiphaga sp. H8: EGT29_13430
Entry
EGT29_13430       CDS       T05719                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
pig  Pigmentiphaga sp. H8
Pathway
pig02024  Quorum sensing
pig03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:pig00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EGT29_13430
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    EGT29_13430
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pig03019]
    EGT29_13430
   03036 Chromosome and associated proteins [BR:pig03036]
    EGT29_13430
Messenger RNA biogenesis [BR:pig03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     EGT29_13430
Chromosome and associated proteins [BR:pig03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    EGT29_13430
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AZG08787
LinkDB
Position
2826131..2826367
AA seq 78 aa
MSNKGQLLQDPFLNVLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPSRPVNFQVEAAAD
NT seq 237 nt   +upstreamnt  +downstreamnt
atgagcaataaagggcaattgctacaagaccccttccttaacgtgctgcgtaaagagcac
gtacctgtctccatttacctcgtcaacggcatcaagctgcaaggccagatcgaatccttc
gatcaatacgtggtcctgctgcgcaacaccgtgacgcaaatggtctacaaacacgccatt
tcgaccgtcgtcccctcgcgtccggtcaacttccaggttgaagcagctgcagactaa

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