Pigmentiphaga sp. H8: EGT29_13430
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Entry
EGT29_13430 CDS
T05719
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
pig
Pigmentiphaga sp. H8
Pathway
pig02024
Quorum sensing
pig03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EGT29_13430
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EGT29_13430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pig03019
]
EGT29_13430
03036 Chromosome and associated proteins [BR:
pig03036
]
EGT29_13430
Messenger RNA biogenesis [BR:
pig03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EGT29_13430
Chromosome and associated proteins [BR:
pig03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
EGT29_13430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AZG08787
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All DBs
Position
2826131..2826367
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AA seq
78 aa
AA seq
DB search
MSNKGQLLQDPFLNVLRKEHVPVSIYLVNGIKLQGQIESFDQYVVLLRNTVTQMVYKHAI
STVVPSRPVNFQVEAAAD
NT seq
237 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaagggcaattgctacaagaccccttccttaacgtgctgcgtaaagagcac
gtacctgtctccatttacctcgtcaacggcatcaagctgcaaggccagatcgaatccttc
gatcaatacgtggtcctgctgcgcaacaccgtgacgcaaatggtctacaaacacgccatt
tcgaccgtcgtcccctcgcgtccggtcaacttccaggttgaagcagctgcagactaa
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