Pigmentiphaga sp. H8: EGT29_16330
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Entry
EGT29_16330 CDS
T05719
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pig
Pigmentiphaga sp. H8
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pig03016
]
EGT29_16330 (truB)
Enzymes [BR:
pig01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EGT29_16330 (truB)
Transfer RNA biogenesis [BR:
pig03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EGT29_16330 (truB)
Prokaryotic type
EGT29_16330 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AZG09302
UniProt:
A0A3G8GPT0
LinkDB
All DBs
Position
complement(3454038..3454976)
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AA seq
312 aa
AA seq
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MASRRGRALDGVLLLDKPEGLSSNHALQRARRILDARKAGHTGTLDPFATGLMVLCFGEA
TKFSGGMFDADKSYTATLALGEETDSGDRTGVPVGFPGQDPAAAVDEAGMLDVLSRFVGR
ISQVPPMYSALKRDGKPLYEYAREGVELEREPRQVTIHGLRLLSLSGRSATIDVACSKGT
YVRTLAQDVGRALGCGAHLTALRRTRTAGFDLAQAWTLERLEALADPAGALLPIESLLAD
LPVVRLDAAAARRFMQGRKERMVAGDATGTAAAETDAGKVRVAGPDGGFLGTARCEDGWL
QPDRLISFKETT
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcttcccgacgcgggcgtgcgctggatggtgtgttgttgctggataaacccgagggc
ttgtccagcaatcatgccttgcagcgcgctcggcgcatcctggatgcgcgcaaggcgggg
cataccgggacgctggatccgttcgcgacaggcctgatggtgctgtgcttcggcgaggcg
accaagttctccggcgggatgttcgatgccgacaagagctataccgccacgctggcgctg
ggcgaggaaaccgacagcggcgaccgtacgggcgtgccggtcggcttccccggccaggat
cccgcggcggccgtggacgaggcggggatgctcgacgtgttgtcacgcttcgtcggcagg
atttcgcaggtgccgcccatgtattcggcgctcaagcgcgacggcaagcccttgtacgaa
tacgcgcgcgagggcgtcgagctggagcgggaaccgaggcaggtcacgattcatggattg
cggctgctgtcgctgtccggacgatcggcgacgatcgacgtcgcatgtagcaagggcacc
tacgtccgtacgctggcgcaggacgtcggccgggcgctgggatgcggcgcgcacctgacg
gcgctgcgccgcacgcgcacggcggggttcgatttggcccaggcctggacgctggagcgg
ctggaagccctggccgatccggccggcgcgctgctgccgatcgagtcgctgctggccgac
ctgccggtcgtgcggctggacgccgcggcggcccggcgcttcatgcagggacgcaaggaa
agaatggtcgccggcgatgcaaccggcacggcggccgccgagacagatgcaggcaaggtc
cgggttgccggaccggacggtggattcctgggaacggctcgctgcgaggacggctggctg
cagcccgacagattgatttcattcaaggaaacgacatga
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