Pigmentiphaga sp. H8: EGT29_19280
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Entry
EGT29_19280 CDS
T05719
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pig
Pigmentiphaga sp. H8
Pathway
pig03030
DNA replication
pig03430
Mismatch repair
pig03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGT29_19280
03430 Mismatch repair
EGT29_19280
03440 Homologous recombination
EGT29_19280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pig03032
]
EGT29_19280
03400 DNA repair and recombination proteins [BR:
pig03400
]
EGT29_19280
Enzymes [BR:
pig01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EGT29_19280
DNA replication proteins [BR:
pig03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EGT29_19280
DNA repair and recombination proteins [BR:
pig03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EGT29_19280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
tRNA_anti_2
RecG_wedge
Motif
Other DBs
NCBI-ProteinID:
AZG09828
UniProt:
A0A3G8GNH1
LinkDB
All DBs
Position
complement(4082676..4086167)
Genome browser
AA seq
1163 aa
AA seq
DB search
MSQSPTPPFVHLRVHSEFSVSDGIVRISDLVKKVAALEQPAIALTDLSNLFGLIKFYKAA
RGKGIKAIAGCDVWVTNDADRDKPYRMLLLVRDRAGYLNLCELLTQAFLTNQHRGRGEIR
PEWLDTYGPGLIALSGGRQGDVGQALEAGNHEAALAFARHWLKVFPGGYYVELQRAGREG
DETYVQAAMRLAAECGAPVVATHPVQFIEREDFRAHEARVCIAEGEILANPRRQRLYTEE
QYLLSSQEMAERFADVPSALANTVAIATRCNLTLELGNPKLPNFPTPEGVTLSEYLVQLS
KEGLARRMEQLFPDEKERAAHQEEYDQRLDKECQTIIDMGFPGYFLIVQDFINWGKNNGV
PVGPGRGSGAGSLVAFSLGITDIDPIRYDLLFERFLNPERVSMPDFDIDFCQDNRDKVIE
YVKQKYGRDAVSQIATFGTLGAKAVIRDAGRVLDLPYLFCDGLSKIIPHSPADPWSLERA
LNEEPVFKERYDNDEEAHALIDLAQPLEGLTRNIGMHAGGVLIAPGKLTDFCPLYCQPGQ
SHIAVSQFDKDDVEAVGLVKFDFLGLRNLTILDWAVRYVREFNEGMRDFDVMALPLDDLD
SYKLLSDGNTTAVFQLESRGMKELLKKLRPSNFEDIIAVLALYRPGPLGSGMVDDFVNRK
HGRAKAEYFHSDLEAVLKSTYGVIVYQEQVMLISQIIGGYTLGGADMLRRAMGKKKPEEM
AKHREIFQSGAEKKGYDPDIAVTLFNLMEKFAEYGFNKSHTAAYALIAYQTAWLKAHHPA
EFMAATMLSDMDDTDKVQIFWADTVANKVKVLPPDINLSNYRFEPVLDEHSARGLPPRTI
RYGLGAVKGTGQSAVEEILRARAEKGPFVDLFDFCRRIDRHLVNRRAIEALIKAGAFDTL
SPNRAAVLATLGTAMDAAEQAARAASQVSLFGGDDHADLAGDLADVEPWDERERLGQEKT
ALGFYFSGHLFDAYRTEVRRFVRNPLSNLQPSRDLQWMAGILSAVRTQMTRRGKMVFAVL
DDGSAQVEISVFNELYERHRSRLREDQLLIISGKVSNDEYSGGMRIVADDLFDLQMAREA
KARALSIRLNGNAHADSLREVLNPHRADPENGFPGTPVEIVYNRGDAKCVVRLSEDWRVR
VPDVLIQQLGKLTGQPADVGLEY
NT seq
3492 nt
NT seq
+upstream
nt +downstream
nt
atgtcccagtcgcctaccccccccttcgtccatctgcgcgtccactccgagttctcggtg
tcggacggcatcgtccgcatctccgacctggtcaagaaagtcgccgcgctggagcagccg
gcgatcgcgctgaccgacctgtccaacctgttcgggttgatcaagttctacaaggcggcg
cggggcaagggcatcaaggccatcgccggctgcgacgtctgggtgaccaacgatgccgac
cgcgacaagccttaccgcatgctgttgctggtgcgcgaccgcgccggctacctgaacctg
tgcgaactgctcacgcaggccttcctgaccaatcagcatcgcggccgcggcgagatccgg
cccgaatggctggacacctacggtccggggctgattgccctgtccggcgggcgccagggc
gacgtgggccaggcgctggaggccggcaaccacgaggccgcgctggcgttcgcgcgccac
tggctgaaggtattcccgggcggctactacgtcgaattgcagcgcgccggccgcgaaggc
gacgagacctacgtgcaggccgcgatgcggctggcggccgaatgcggcgcgccggtggtc
gccacccacccggtgcagttcatcgagcgcgaggatttccgcgcccacgaggcccgggtc
tgcatcgccgaaggcgagatcctggccaacccgcgccgccagcggctgtataccgaagaa
cagtacctgctgtcctcgcaggaaatggccgaacggttcgccgacgtgccctcggccctg
gccaatacggtggccatcgccacgcgctgcaacctgacgctggaactgggcaatcccaag
ctgcccaacttccccacgcccgagggggtgacgctgtccgaatacctggtgcagctgtcc
aaggagggcctggcccgccgcatggaacagctcttcccggacgagaaggaacgcgccgcg
caccaggaggaatacgaccagcggctggacaaggaatgccagaccatcatcgacatgggc
tttcccggctacttcctgatcgttcaggacttcatcaactggggcaagaacaacggcgtg
cccgtcggccccggccggggatcgggcgccggctcgctggtggccttcagcctgggcatc
accgacatcgatccgatccgctacgacttgctgttcgagcgcttcctgaatcccgagcgg
gtctccatgcccgacttcgatatcgacttctgccaggacaaccgcgacaaggtcatcgag
tacgtcaagcagaagtatgggcgcgacgcggtcagccagatcgccaccttcggtacgctg
ggcgccaaggcggtcatccgcgacgcgggccgggtcctggacctgccctacctgttctgc
gacggcctgtccaagatcatcccgcactcgccggccgatccgtggagcctggaacgcgcg
ctgaacgaagagcccgtcttcaaggagcgctacgacaacgacgaggaagcgcatgcgctg
atcgacctggcccagccgctcgagggcctgacccggaacatcggcatgcacgccgggggc
gtgctgatcgccccgggcaagctgaccgatttctgcccgctgtactgccagccgggccag
agccacatcgcggtgtcgcagttcgacaaggacgacgtggaagccgtgggcctggtgaag
ttcgacttcctgggcctgcgcaacctgaccattctcgactgggccgtgcgctacgtgcgc
gagttcaacgagggcatgcgcgacttcgacgtcatggcgctgccgctggacgacctcgat
tcctacaagctgctgagcgacggcaacaccaccgccgtgttccagctggaatcgcgcggc
atgaaggaactgctcaagaagctgcgccccagcaacttcgaagacatcatcgccgtgctg
gcgctgtaccggccgggcccgctgggttccggcatggtggacgacttcgtcaaccgcaag
cacggccgcgccaaggccgaatacttccactcggatctggaggcggtgctcaagagcacc
tacggggtcatcgtctaccaggaacaggtgatgctgatctcgcagatcatcggcggctac
acgctgggcggcgccgacatgctgcgccgggccatgggcaagaaaaagcccgaggaaatg
gccaagcaccgcgagatcttccagtcgggcgccgaaaagaagggctatgaccccgacatc
gcggtcacgctgttcaacctgatggaaaagttcgcggaatacggcttcaacaagtcgcat
accgccgcctacgcgctgatcgcctaccagaccgcgtggctcaaggctcaccatccggcc
gagttcatggccgccaccatgttgtccgacatggacgacaccgacaaggtccagatcttc
tgggccgatacggtggccaacaaggtcaaggtgctgccgcccgacatcaacctgtccaac
taccgcttcgaaccggtgctggacgaacattcggcgcgcggcctgccgccgcgcaccatc
cgctacgggctgggcgcggtcaagggcaccgggcagagcgcggtcgaggaaatcctgcgc
gcgcgggccgagaaggggccgttcgtcgatctgtttgatttctgccggcgcatcgaccgc
cacctggtgaatcgccgcgccatcgaggccttgatcaaggccggcgccttcgacacgctg
tcgccgaaccgcgccgcggtgctggccaccctgggcacggccatggacgccgccgaacag
gccgctcgcgccgccagccaggtgtcgctgttcggcggggacgaccacgccgacctggcg
ggcgacctggccgatgtcgaaccttgggacgaacgcgagcgcctgggccaggaaaagacc
gcgctgggtttctacttcagcggccacctgtttgacgcctaccgcaccgaggtccgccgg
ttcgtgcgcaatcccttgtccaacctgcagcccagccgcgacctgcagtggatggcgggc
atcctgtccgccgtgcgcacgcagatgacgcggcgcgggaagatggtgttcgccgtgctg
gacgacggctccgcgcaggtggagatctcggtgttcaacgagttgtacgaacggcatcgc
agccggctgcgcgaagaccagttgctgatcatttccggcaaggtcagcaacgatgaatat
tcgggcggcatgcgcatcgtggccgacgacctgttcgacctgcagatggcgcgcgaggcc
aaggcccgggcgctgtccatccgcctgaacggcaacgcgcacgcggattccctgcgcgaa
gtcctcaacccgcatcgcgccgaccccgagaacggcttcccgggtacgcccgtcgagatc
gtctacaaccgcggcgacgccaagtgcgtggtgcgcctgagcgaggactggcgggtgcgg
gtgccggacgtgctgatccagcagttgggcaagctgacggggcagccggccgatgtcggg
ctggagtactag
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