Pigmentiphaga sp. H8: EGT29_23045
Help
Entry
EGT29_23045 CDS
T05719
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pig
Pigmentiphaga sp. H8
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pig03016
]
EGT29_23045
Enzymes [BR:
pig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EGT29_23045
Transfer RNA biogenesis [BR:
pig03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
EGT29_23045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AZG10520
UniProt:
A0A3G8GRB9
LinkDB
All DBs
Position
4898018..4900066
Genome browser
AA seq
682 aa
AA seq
DB search
MHVLYEDDGGFKAATVLSETDTSLQVEAASGKRSKIKKSAVIVRFEQPSPEALLKEADAA
SQDLDLEFLWECAPKDDFDIPVLAEEYYGHPPTPVEQAAMLLRVHGAPVYFHRRGKGKYR
PAPPDILAAALAALEKKKRQAEQQQAWVDEIKAGTLPEPLARQAETLLFKPDKNTLEWKA
LDAACTQLQKRPERLLMDLGAFPSAIAIHKRRFYTQQFPRGTGFAPAEVPAITRELPLAE
VEAYSVDDITTTEIDDALSVQALEDGTLRVGIHIAAPALAVTRDSDLDALARARMSTVYM
PGAKIPMQPDEVIAAFSLDAGRPVPALSLYVVAHPDTGEVLSHESRIERIVVRENLRHNT
LDDLVGEEQLDDPAAELPYGHVFRPLWRLAKALSRRRDEVRGKPESNNRVDFSFYVDGDP
DHPESAHVRIEQRKRNAPLDRLVAEYMILANNLWGGLLSSCGVPGIYRSQQMGRVRMGTA
AAPHDSIGVPQYAWCTSPLRRYVDLVNQGQLIAAIEHGVSARLVAPFKPREADLYAVISA
FEAKYGAYADFQQAMERFWCLRWIKQQGLRRIEAVVLREDLVRLKDAPFYTRVGTLPDLE
RGRHVLLEVMGDDELDLSLDCRFLDVVDAQGDAEDIEDEPTAEAAAEIAETDAADGPDAT
DQRLDGAGAPAPDDGPKPEEGA
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtcctctacgaggatgacggcggattcaaggccgccactgtcctgagcgaaacc
gacaccagcctgcaggtcgaggcggccagcggcaagcgcagcaagatcaagaaatccgcg
gtcatcgtgcgtttcgagcagccgtcgcccgaggccctgctgaaggaggccgacgcggcc
tcgcaggacctggacctggaattcctgtgggaatgcgcgcccaaggacgacttcgacatc
cccgtgctggccgaggaatactacggccacccgcccaccccggtggaacaggccgccatg
ctgctgcgcgtgcacggcgcgccggtctatttccaccgccgcggcaagggcaagtaccgc
cccgccccgcccgacatcctggcggccgcgctggccgcgctggaaaagaagaaacgccag
gccgaacagcagcaggcctgggtggacgagatcaaggccggcaccctgcccgagccgctg
gcccggcaggccgagaccctgctgttcaagcccgacaagaacaccctggagtggaaggcg
ctggacgccgcctgcacccagttgcagaagcgccccgagcggctgctgatggacctgggc
gccttccccagcgcgatcgccatccacaagcgccgcttctatacccagcagttcccgcgt
ggcacgggcttcgccccggccgaggtgcccgccatcacgcgtgaactgccgctggccgag
gtcgaagcctattcggtggacgacatcacgaccaccgagatcgacgatgcgctgtcggtg
caggcgctggaggacgggacgctgcgggtcggcatccacatcgccgccccggccctggcc
gtcacgcgcgacagcgacctggacgcgctggcccgcgcgcgcatgtccaccgtctacatg
ccgggcgccaagatcccgatgcagcccgacgaggtgatcgccgccttctcgctggatgcc
ggccggcccgtgcccgcgctgtcgctgtacgtcgtcgcccatcccgacaccggcgaggtc
ctgtcgcacgaatcgcgcatcgagcgcatcgtcgtgcgcgagaatctgcgccacaacacg
ctggacgatctggtcggcgaagaacagctggacgaccccgccgccgaactgccctacggc
cacgtcttccgcccgctgtggcggctggccaaggccctgtcccgccgccgcgacgaagtc
cgcggcaagcccgagtcgaacaaccgggtcgacttcagcttctacgtggacggcgacccc
gatcaccccgagtcggcgcatgtgcgcatcgagcagcgcaagcgcaacgcgccgctggac
cggctggtggccgaatacatgatcctggccaacaacctctggggcgggctgctgtcgtcc
tgcggggtgccgggcatctaccgctcgcagcagatgggccgggtgcggatggggaccgcc
gcggcgccccatgattcgataggcgtgccgcagtacgcctggtgcacttcgccgctgcgc
cgctatgtggacctggtcaaccagggccagttgatcgccgccatcgagcacggcgtatcg
gcacgcctggtcgcccccttcaagccgcgcgaggccgacctgtacgccgtcatcagcgcc
ttcgaggccaagtacggtgcctatgccgatttccagcaggccatggaacgcttctggtgc
ctgcgctggatcaagcagcaaggcctgcgccggatcgaagccgtggtcctgcgcgaagac
ctggtcaggttgaaggacgcgcccttctatacccgcgtgggcaccctgcccgacctggag
cgcggccgccacgtcctgctggaagtgatgggcgacgacgaactcgacctgagcctggac
tgccgcttcctggacgtggtggatgcgcagggggacgccgaggacatcgaggacgagccg
acggccgaagccgcggcggaaatcgccgagaccgacgcggcggacggccccgacgccacg
gaccagcgcctggacggcgcgggcgcgcccgcccctgacgacgggccgaagccggaagaa
ggggcctga
DBGET
integrated database retrieval system
