Pigmentiphaga sp. H8: EGT29_24475
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Entry
EGT29_24475 CDS
T05719
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pig
Pigmentiphaga sp. H8
Brite
KEGG Orthology (KO) [BR:
pig00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pig03016
]
EGT29_24475 (thpR)
Enzymes [BR:
pig01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
EGT29_24475 (thpR)
Transfer RNA biogenesis [BR:
pig03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
EGT29_24475 (thpR)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AZG10784
UniProt:
A0A3G8GRX1
LinkDB
All DBs
Position
5197873..5198415
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AA seq
180 aa
AA seq
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MPATASDRSRCFIALGPDDDTRARLAALGASLPPARLLPADLHLTIAFLGSLTADHETRL
RAALAPLARALPVLDGESLELWPQPARPRVAVASFSLPAPLRRLVEDTQGIVRGMGLPVE
GRPFRPHVTLARFKAGQSMPDLPRPMPAIPPARFGTLGLYASAPAGSEWRYAALFRFDLA
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcccgccaccgcctccgaccgttcccgctgcttcatcgcccttggccccgacgacgac
acgcgagcccgcctggccgcgctgggcgccagcctgccgccggcacgcctgctgcccgcc
gacctgcatctgaccatcgctttcctgggcagcctgacggccgatcacgagacccggctg
cgcgcggcgctggcacctctggcgcgcgccctgcccgtgctggacggagaatcgctggaa
ctgtggccacagccggcccggccgcgcgtggcggtggccagcttctcgctgcccgcgccg
ctgcgccggctggtcgaggacacgcaaggcatcgtgcgcggcatggggctgccggtggag
ggccgccccttccggccgcatgtgacactggcacgcttcaaggcgggccagtccatgccg
gacctgccccggccgatgccggcgattccgccggcgcgcttcggcacgctgggactgtat
gcctcggcgccggccggatcggaatggcgctatgccgcgctgttcaggttcgacctggcc
tga
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