Paenibacillus sp. IHBB 10380: UB51_02570
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Entry
UB51_02570 CDS
T03836
Name
(GenBank) helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pih
Paenibacillus sp. IHBB 10380
Pathway
pih03420
Nucleotide excision repair
pih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UB51_02570
03430 Mismatch repair
UB51_02570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_02570
Enzymes [BR:
pih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UB51_02570
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UB51_02570
MMR (mismatch excision repair)
Other MMR factors
UB51_02570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
SLFN-g3_helicase
AAA_22
DEAD
Viral_helicase1
AAA_30
PhoH
nSTAND3
ResIII
AAA_11
NACHT
Mg_chelatase
Motif
Other DBs
NCBI-ProteinID:
AJS57551
UniProt:
A0A0D3V7E5
LinkDB
All DBs
Position
601985..604168
Genome browser
AA seq
727 aa
AA seq
DB search
MEENFQSAYQEEENRLNATVSEIDNQLQRLRGIDVYTGHDFTEQILEAGREEKRQDLNKS
LQEPYFGRLDFQSTKDQDRKPLYIGKIGVDREVISDQPLVIDWRAPVASLFYSFTGGDEA
AAYEAPEGLIEGLVYLKRNVVIRKQILERVADTFNRESEQPAVSDEFLVYRLGENKDNRL
RDIVSTIQAEQDKIIRAAKNTALIIQGVAGSGKTTVALHRLAFLLYQYKDQVSAEKMIIF
APNHMFLDYISDVLPELGVGDIQQSTFADWAMDVLELDLPLVDNSQTLDYWFEGSGGTRE
VNDEVSGRFKGSLGLQKMIKSWITALESSSVPDVDFIPWEGAVLPQTQILYWYNEEYKPY
PLAKRKERVMARIHRWVEMELKKSPSEAVFKDRKKKAAQREKSYATKWPKYEPLTLYKQM
FRAIKVPTGSPEELLLGIPVHVLKSTQKDLKQDLIREEDLPALLYIHYLLNDMKSEQRFD
HIVIDEAQDFSPFQVAVLDLFVRGHSFTILGDLSQGIHAYRGVHHWDEMSSLFEPEHTAY
FALTRSYRSTMEIIEFANGILEKGVGSDLMAVPVFRSGDAVRLIQYSEHGRLNNLRDALS
RLSSKEYRTVAILTRTLREAKALYEQMVGDVEDLHLIDGGKQAYEGGLSILPVYLSKGLE
FDAVIVADADLEHYGPQAWDAKLMYVGCTRALHELWVLHGEHVPDYLGNSQEEIMVHGWP
EIEEATR
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
ttggaggaaaattttcaaagtgcctatcaagaggaagagaacaggctgaacgcaaccgtc
tcagaaattgataaccagcttcaaagattgcgtgggatagatgtctatacgggtcatgat
ttcacggagcaaattttggaggctgggcgtgaagagaagcgtcaggatttaaataaaagc
ctgcaagagccgtattttggccgtttagattttcaaagtaccaaggatcaagatcgaaag
ccgctatatatcggcaaaataggtgtggatcgtgaagtgatctccgatcagccacttgtc
attgattggcgtgctccggtagcgagtctattctactcatttaccggtggagacgaagca
gcagcttatgaagcgccggaaggactaattgaaggtcttgtgtacctgaagcgtaacgtc
gttatccgtaaacagatattagagcgagttgcggatacgtttaaccgtgagagtgaacaa
cctgctgtatctgatgagtttctagtctatcggcttggtgagaataaggataaccgttta
cgtgatatcgtctctacgattcaggctgaacaggataaaattattcgtgcagcgaagaat
acagcgctcattattcaaggtgtcgcaggtagtggtaaaacaactgtagcactacataga
ctagcctttttgctgtaccaatataaagatcaagtatctgctgaaaaaatgattattttt
gcaccaaaccatatgtttttggattatatttctgacgtgcttcctgaattgggggtcgga
gatattcagcaaagtacattcgctgattgggctatggatgtacttgaactagacctaccg
ctagtagataattcacagacgttggattattggtttgaaggttctggaggaacacgcgaa
gtcaatgatgaggtatccggtagattcaagggttccttagggttacaaaaaatgattaag
agctggataactgccttagaatcatcctctgttccagatgtagattttattccatgggaa
ggtgctgtactgccacagacccagattctatattggtataatgaagaatataaaccttat
cctcttgccaaaagaaaagaacgagtgatggcgagaatacatcgctgggtggaaatggag
ctcaaaaagtcaccgtctgaagccgtatttaaggatcgaaagaaaaaggcagcccagcga
gagaaaagttacgcaacgaagtggccgaaatacgagcctttaactttatataaacaaatg
tttcgggcgatcaaagtccctacaggttcgccagaggagttgctactaggcattcctgtg
catgttctgaaatcaacgcaaaaggatcttaaacaagacttgatccgtgaggaggatctt
cctgcccttctgtacattcattatttattgaatgatatgaagagtgagcaacgattcgat
catatcgtcattgatgaggcgcaggacttttcaccttttcaggtagccgtattagatcta
tttgttcgaggccattcttttacgattcttggtgatttatctcaggggatccacgcttat
cgtggtgttcatcattgggacgagatgagttcattatttgaacccgagcatactgcttat
ttcgctttaactcgaagctaccgttctaccatggaaattattgaatttgccaatggtatt
ttggagaagggtgtgggcagtgatttaatggctgtacccgtgttccgtagcggagatgcg
gtacggttgattcaatatagtgagcatggtcgattgaataatctgcgtgatgcattatca
agactttcctcaaaggaatatcggacggtagcgattctgacaaggacgcttcgagaagcc
aaagcgttgtatgagcagatggtaggagatgtagaggatctgcatttgattgatggtggg
aagcaagcttatgaaggcggtttgtctattcttccagtttatctgtcaaaagggcttgaa
tttgatgccgtcattgtagcggatgctgatcttgaacattatggacctcaggcttgggat
gctaagctcatgtatgtaggctgtacccgtgcgttgcatgagttgtgggttctccatggt
gaacatgtgccagattatttaggaaactctcaagaggagattatggttcacggttggccg
gaaattgaagaagctactaggtaa
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