Paenibacillus sp. IHBB 10380: UB51_02955
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Entry
UB51_02955 CDS
T03836
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
pih
Paenibacillus sp. IHBB 10380
Pathway
pih03030
DNA replication
pih03430
Mismatch repair
pih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UB51_02955
03430 Mismatch repair
UB51_02955
03440 Homologous recombination
UB51_02955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pih03032
]
UB51_02955
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_02955
Enzymes [BR:
pih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UB51_02955
DNA replication proteins [BR:
pih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UB51_02955
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UB51_02955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AJS57615
LinkDB
All DBs
Position
complement(696374..697015)
Genome browser
AA seq
213 aa
AA seq
DB search
MDFVAIDFETANANRSSACALGLVEVQGGIITSEQVWLIDPEQHFDYRNIQIHGITESMV
SGMPTFHELWPTIEPLLQGKQIVAHNASFDMSVLRYCLDKSLIDYPTFQYFCTYLLSKKM
LQGMPSYKLNVIAEYYDIPLNHHDALDDARASATILLKLLEQEQYSGPMQLSIAHGCKIG
SMFTGGYTPFSAPAKKRPKKSSPRNLLTATPTL
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atggattttgtagcaattgactttgaaacagcgaacgccaacagatcaagcgcctgtgct
ttaggccttgttgaagtacaaggaggcatcattacatcagaacaagtctggttaatcgat
ccagagcagcattttgactatagaaatatacagatccacgggattactgaatctatggtt
agcggaatgcccacgttccatgagctatggccaacgatcgaacctctcctgcaaggaaaa
cagattgttgcgcacaatgcttcttttgatatgagcgttttacgttactgtttagataaa
tctctcatagattaccctactttccaatacttctgcacctatctactcagcaaaaaaatg
ttgcaaggcatgccttcctataaattaaatgttattgctgaatattatgacattccgctc
aaccatcatgatgcattagatgatgctcgtgcatctgctacgattctattgaaactacta
gaacaggaacaatactcgggtccaatgcaactctccatcgctcatggttgcaagataggg
tcgatgtttactggaggttatacccccttctcggctcctgcaaagaaacgtccgaagaag
tcatcccctagaaatctcctaacagcaactccaaccttataa
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