Paenibacillus sp. IHBB 10380: UB51_03390
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Entry
UB51_03390 CDS
T03836
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pih
Paenibacillus sp. IHBB 10380
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_03390
Enzymes [BR:
pih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UB51_03390
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
UB51_03390
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AJS57691
UniProt:
A0A0D3V7S4
LinkDB
All DBs
Position
792704..796234
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AA seq
1176 aa
AA seq
DB search
MSVHFLIGRSGSGKTTTILQDISARLREQPQGKPMILLVPEQGSYQAEHSLVTSGTIKGS
VRAQVLSFQRLAYRVMQETGGSARVGISEEGKKMLLYKIIQRRKEELRLFGASGDQMGFV
GRLGQLYTEMKRYCIDASQVEGQLASMRATGGGTPILRDKLGDILTLYQDFEQELSPLYI
DNEDTLVALSEAVSQSSYIKDADIWIDGFHGFTPQEFVVIQQLMKCASSVTIALTLDRPY
SLGMLPHELDLFHPTATTYVKMKGMASELSVDSFDTLLNSDPLPRFAESPELAHLERGFD
RRIPWQGQEQHKDGSCSGISLHVAVNRRTEVEGALREMIRLARDEGVRYRDMAIFVRQLG
DYEPIIGSIFRDYGVPFFLDQKRSELHHPLVEFIRSSLDIVQRRWRYEDVFRCIKTDLLL
PLDGSLDRMDMDRLENYVMASGIQGYRWGDAYPWKRVPSLSLEEGDPDREKSGEQLLELM
ERCRGAVTRPLFSFEERLKGGASARDFCTAVYGLLEEAEVPQKLDILQHESLQNGFPELA
KEHRQLWGAILDLLDQIVEMMGDEKIELELFIGILETGLTELKLALVPPSLDQVLIGNMD
RTRASGVKYTFLLGFNEGVVPAAYQEDGVLTEQERSVLIDSGMELAPSISRKLLDERFLI
YNALTSASRHVWISYAAADEDGKALLASEVIRHVRKMFENLEELPLLGQPLLGQAQQQQQ
AFVTSPQQTLSHFIVQLRQWKQGTEISAFWWDVYNWYLAREEWQGPLAMLLRSLFYRNDT
KTLHVDTSRRLYGAKVRTSVSRMEKFTACPFSHFASHGLKLKERQVYRLKAPDIGQLFHA
ALSDMATRLQTRNISWGSLTPEECRQEAGIAVDRLAPLLQGEILLSTKRYGYISRKLKNI
VGRASVILGEHARRGSFEPVGLELDFGPGKTLPPLTFPLRNGSVMEVIGRIDRVDMAQGE
QGMLLRVIDYKSSQNDLRLHEVYYGLSLQLLTYLDVLLTYAEEWLGKAAIPAGTLYFHVH
DPILQSANGMSHEQAADELLKRFKMKGLLLSDRDAIAKMDSTLDKGHSAILPVAVKSDGS
FYSSAAVATPEQWDTLLSSVRSNIVDIGTRITEGDVTIEPYRIQHETACTYCSFKPVCQF
DEAIEGSEYHVLGKPDKAQVWNLLSQTQGGDTPCTK
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttcattttcttatcggacgctcgggaagcggtaagacgacaactatattgcag
gacatctcagcacgacttcgggagcaaccacaaggcaagcctatgattctacttgtaccg
gagcaaggctcctatcaagctgagcacagccttgtaacctctggaacgatcaaagggagc
gtacgtgctcaagtgcttagttttcagcgtctagcctatcgagtgatgcaggagacgggc
ggatcagctcgagtagggattagcgaagaaggtaaaaaaatgcttctttacaaaatcatc
caacgacgtaaagaagaactgagattattcggagcatcaggagatcaaatgggattcgta
ggcagactgggacaactctatacagagatgaagagatactgcattgatgcttctcaagtg
gaaggacagctcgctagtatgagggcaacaggtggaggaacgccaattctacgagataag
ttgggtgacattctaacgttgtatcaagattttgagcaggagttgtctcccctttatatc
gataatgaagatacgctagtagctctctctgaagctgtttctcaatctagttatatcaaa
gatgcagatatatggattgatggatttcatggctttactccccaagaatttgttgttata
cagcagctaatgaaatgtgcttcttctgtaacgatcgcacttacattggatagaccctat
agtttgggaatgctccctcatgagcttgatctctttcatccgacagctacaacgtacgtg
aagatgaagggaatggcatccgagttaagcgtggattcttttgataccctattaaattca
gaccctcttccaaggttcgcagagagtcctgaactagcacatcttgaacgtggctttgac
cgtcgaattccttggcaaggccaagaacagcacaaggatgggagttgttctggaatatca
ttgcatgtcgctgtgaatcgccggacagaggtagaaggggcactgcgtgaaatgatacgt
ttggcacgagatgagggtgtgagatatcgggacatggcgatattcgttcgccaattagga
gattatgagcctattattggatctatttttcgtgattatggcgttcctttctttcttgac
cagaagagaagtgaactacaccatccgttggtagagttcatcagatcctcgttagatatt
gtgcagcggcgctggcgatacgaggatgtatttcgctgtattaagacagatctgttgctt
ccactggacggttcactagatcggatggatatggatcggttagaaaattatgtgatggca
agtggaattcagggctatcgctggggggatgcctacccttggaagcgagtgcctagtctt
tctcttgaagaaggtgaccctgatcgagagaagagtggggagcaactgcttgaattaatg
gaacgatgccgtggcgcggtaacgagaccgttgttttcttttgaagaaagacttaagggg
ggcgcatcggctcgtgatttctgtactgcagtctatggtctcttggaagaggctgaagtt
ccgcaaaagttggatattcttcagcatgaatctttgcagaatggatttccagaattggct
aaggagcatcgtcaattatggggagctatcctcgatttgctggatcagattgtagagatg
atgggtgacgagaagattgagcttgaattgtttattggtattctagaaacgggcctaacc
gagttaaagttggctctagttccaccttctcttgatcaagtcttgatcgggaatatggat
cggacacgggcgagtggcgtgaaatatacgtttttattaggcttcaatgaaggtgttgtg
cctgcggcatatcaagaagatggtgtacttacggaacaagagcgaagtgtattgattgat
tcaggtatggagcttgcacctagcatttcgcgtaagttactcgatgaaagattccttatc
tataatgcgctcacctctgcaagtcgtcatgtgtggataagttatgctgcggctgatgaa
gatggtaaagctctactggcgtcggaagtcattagacatgtgaggaaaatgtttgagaat
ctagaggagcttcccttattagggcaaccgctgcttgggcaggctcagcagcaacagcaa
gcttttgtaacgagccctcagcagacactaagtcacttcattgtccagcttagacaatgg
aagcagggaacggagatttctgcattctggtgggatgtttataactggtatttagcgcgt
gaagaatggcagggccctctagcgatgctgttacgttcgctattttatcgaaatgatact
aaaacgttgcatgtcgatactagccgtagattatatggggctaaggtaagaactagcgta
tctcggatggaaaaattcacagcatgtccattctcgcactttgcttcgcatggattgaag
ctaaaggagcggcaggtctatcgactcaaagcaccagatatcggtcaattgttccatgct
gctctaagcgatatggctacgcgcttacagacccgtaacataagctggggaagtttaaca
ccagaagaatgccgtcaggaagcaggaattgctgtagatcgcttagcgccactcttacag
ggtgaaatactgcttagtaccaaacgttatggctatatttctcgtaaattaaaaaatatc
gtaggtagagcctccgtcatattaggggaacatgctcggcggggaagttttgagcctgtc
ggacttgaacttgatttcggccccggtaagacgctacctccgttaacctttccattacgg
aatggttctgttatggaagtcattggacggatcgaccgtgtggatatggcgcagggagag
caagggatgttgctaagggtcatcgattataaatcaagtcagaatgatctacgactgcat
gaggtctactatgggctatcccttcaattgttgacgtatcttgatgtccttctaacctat
gcggaggaatggcttggtaaggctgctattcctgcgggaacactttatttccacgtacat
gatccaattctacagtctgcaaatggcatgagtcatgagcaagcagcagatgaactgctc
aaacgtttcaaaatgaaaggtttacttttgtctgatcgagatgccattgctaagatggat
tcgactctcgataagggtcactctgcgattctgcctgtggcagttaagtcagatggaagc
ttctatagcagtgccgctgtagcaaccccagagcagtgggatacgctactatcttcggtt
cgcagtaatattgtggatattgggacaagaattactgaaggagacgtcacaattgagcct
taccgaattcagcatgagacggcttgtacctactgttcctttaagcctgtatgccaattt
gacgaagctattgaaggtagcgaatatcatgtactgggtaaaccagacaaagcgcaggta
tggaatttgttgtcacagacccaaggaggagatacaccgtgcacgaaatag
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integrated database retrieval system
