Paenibacillus sp. IHBB 10380: UB51_06085
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Entry
UB51_06085 CDS
T03836
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pih
Paenibacillus sp. IHBB 10380
Pathway
pih03420
Nucleotide excision repair
pih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UB51_06085
03430 Mismatch repair
UB51_06085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_06085
Enzymes [BR:
pih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UB51_06085
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UB51_06085
MMR (mismatch excision repair)
Other MMR factors
UB51_06085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AJS58140
UniProt:
A0A0D3V7S2
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All DBs
Position
1345929..1347905
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AA seq
658 aa
AA seq
DB search
MYKLSVTDEDIEYAARVLNLPSGFDVPRVNAIKCMESRDIVACPGSGKTTVLLAKLIILA
RHVPLQNNKGICIITHTNVAIDEIKERLGDKASELLSYPNFVGTLHSFISKFIANPAFVN
FYSSRISRVFEGEDYKSRLLRKFKSLYPPFSGSKLDRFLYGKLNQKLKDSKDNIAILKAK
EDLLLSLELHYIDNIIYQVSFNKKTSAIKNPNTESYKEYVRLIDELLNEGVSSYNDLQGL
ALKYAIEFEKELSRIFSERFSFVFVDEMQDTSSLQLEILNKVFDKQKVVFQCFGDPQQTI
YESEDKGCSWQPREPLFIKNSNRMSKSIAKVADVVALQPYDMQGREEQRADLHSPVIITY
KDDDVSHVLETFAKLIIKYQLNERDSSTFKAVGMVKARNEGLSITSYFPEFDKQDVKKKV
NKDFSELQSYLVKLEKEVVNREGVKAYYHRFILAILRYLRIRDIRTNEGRFFSNVSFLKY
LREEDERLYKAIHKYFARIVLKIEEGKSVLISFKYIIALIVNRLFNHEVDLRNDQFIEGT
ASSPTLVVGETKENVYTFNNLSIEIDSVHGVKGQTHTATLYLETFYFSKTNESIIEYLTG
GQKSNIEVHLEKHIRVAYVAMTRPTDLLCIVLNETVYLENKEQLKRLGWEHQMDVLQE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgtataagttaagtgtaacagatgaagacattgaatacgcagcgagagttctgaattta
ccgagtggttttgatgtgccaagagttaatgctataaaatgcatggagagtagagatata
gtcgcttgtccaggtagtggaaaaacaacagtcttactcgctaagttaattattttggca
aggcatgtacccttacaaaataataaagggatatgtattattactcatactaacgtagca
attgatgaaataaaagagaggttaggcgacaaagccagtgaactgctctcatatcctaat
tttgttggaacattgcattcatttatcagcaagtttatagccaatcccgcatttgttaat
ttttattcttcaagaatatcaagggtatttgaaggtgaagattacaaatctcgactatta
agaaaatttaaatctttgtatcctccattttcgggaagtaaactggatagatttctatac
ggaaagttaaatcaaaagttaaaagattcaaaggataacattgctatattaaaggctaaa
gaagatttactcctgtcactggaacttcattatattgataacattatttaccaagtatca
ttcaacaaaaaaactagcgcaataaaaaatccaaatactgaatcctacaaagagtatgta
agattaatagatgaacttctgaatgaaggagtatcctcttataatgatctacaaggactc
gcactgaagtatgcaattgaatttgaaaaggaattgtcaaggatcttttcggaacggttc
tcatttgtttttgtagatgaaatgcaagatactagttctcttcaattggagatattaaat
aaggtttttgataagcagaaagttgtttttcaatgttttggcgatcctcagcaaacaatt
tatgaatctgaagacaagggatgttcatggcaaccaagggagcctctgttcattaaaaat
agtaatcgaatgagtaaaagtatagcaaaagttgcagatgtcgtagctctgcaaccttat
gatatgcaggggagagaagaacaaagagctgacttgcattcaccagtgattattacatat
aaagatgatgatgtatcacatgttcttgagactttcgccaagctaatcattaagtatcaa
ctgaatgaacgggattcttcaacatttaaagctgttggtatggttaaagcgaggaatgaa
ggattatcaatcaccagttatttccctgaatttgataagcaagatgttaaaaagaaagtt
aataaagatttttctgaacttcaaagttatttggtaaagcttgaaaaggaagtagttaac
agagaaggtgttaaggcttactaccatcgatttattctagcaatcctaagatatctaagg
attagagatatcaggactaatgaaggtagatttttttcgaacgtctcttttctgaaatat
ttacgtgaagaagatgagaggttgtataaagcaatccacaaatactttgcaagaatagtg
ctgaaaatagaggaaggaaaatctgtactaataagctttaagtatattatagctttaata
gtaaatcgattgtttaatcatgaggttgaccttcggaatgatcaatttatagaaggaact
gctagctccccaactttagtcgttggagagactaaagagaacgtatacacctttaataac
ttaagtattgagatagacagtgtacatggagttaaagggcaaactcatacagctacgtta
tatttggaaaccttttatttctcaaaaacgaatgaaagtatcattgaatatttaactgga
gggcagaaatcaaacatagaagtacatttagaaaaacacatacgagttgcgtatgttgct
atgacgagacccactgatttactatgcattgtacttaatgaaacagtttatttagaaaac
aaagaacagttaaaaagattgggttgggaacatcaaatggatgtgctacaggagtga
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