Paenibacillus sp. IHBB 10380: UB51_06915
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Entry
UB51_06915 CDS
T03836
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pih
Paenibacillus sp. IHBB 10380
Pathway
pih03420
Nucleotide excision repair
pih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UB51_06915
03430 Mismatch repair
UB51_06915
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_06915
Enzymes [BR:
pih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UB51_06915
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UB51_06915
MMR (mismatch excision repair)
Other MMR factors
UB51_06915
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PoNi_N
Motif
Other DBs
NCBI-ProteinID:
AJS58270
UniProt:
A0A0D3V877
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All DBs
Position
1550708..1552630
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AA seq
640 aa
AA seq
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MSYISPENWSPADRFTLEPAAEIAVKAEMNNLILAGPGAGKTELLAQRACYLLQTNLCPS
PQKILAISFKTDAAENLKKRVELRCGKELASRFESRTFDSFAKQLLDRFRLGIPEAYRPE
KDYNIVFSQREVQDIVTSYIQERHPNRPNWQQEINFSILFRRLSEDRLPIYEDGEDIYTW
ILVRLWDILVHGREGLSSTLTFPMISKLGDYLLQHNLLIKKALQMTYSHVFLDEFQDTTY
LQYELVKTTFLGTSSILTSVGDDKQRIMGWAGALSDSFEQFKRDFNAGQIELTQNHRSAP
RLIEIQNVLAKIINENSTDASVSSSHSEQEGKCEVWNFQTHIDEAIFVASNIVKRIQHED
ITPRDICIIVKQQEQVYARAVIEELGRQGVHARIEKEYQDLLAEECVQLIVDFFKLATME
KTHESWVRVSELLVYVHGYDLELDHQKILRMELDLNEHILQMRSVLNQVSNDAELCKQRI
DEIVEGILSFIGNEKLFRLYPKYSKGSYFNKLTKDTAEKLSEAYLKHLNWINSIADFLGL
FSVPIMTIHKSKGLEYDTVIFLGLEDDAFWTFRTQRLADMCAFFVALSRAKKQCFFTFSN
SRETLRFGDIQVRSQSSNNISSLYQLLQEANVDVREFNNV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgtcatatattagtccggaaaactggagtccagcagatagattcacattagaaccggct
gcagaaatagcggttaaagctgagatgaataatcttattttggctggtccaggtgcgggg
aaaacggagctacttgcacaacgcgcttgttatctgctgcaaacaaatttatgtccatca
cctcagaaaatattggcgattagttttaaaacagacgctgcagaaaacttgaaaaaaagg
gtagagttaaggtgtggtaaggaacttgcgtcgagatttgaatcaagaacatttgattca
tttgctaagcaacttctagaccgctttagattaggaatcccagaagcctatcgaccagag
aaagattacaacatagtattttctcaaagagaagtacaagatattgtcaccagctatata
caagagcgacatcctaatcgtcctaattggcaacaggaaattaattttagtattttattt
agacgcttgtctgaggatagattgcctatttatgaagatggggaagacatctatacttgg
attttagtaaggctctgggatattctggttcatggaagagaagggctttcaagcacatta
acgtttcccatgatatcaaaacttggagattatttactacaacataatcttttaattaaa
aaggcgcttcagatgacttatagtcatgtttttctagatgaattccaagatacgacctat
ctccaatatgagttagttaagacgacctttttaggaacttcttcaatactgacaagtgta
ggggacgataaacagcgaatcatgggatgggctggggcactctcggattcttttgaacag
ttcaaacgtgacttcaatgcaggtcaaattgagctgactcaaaaccacaggtctgcaccc
agacttattgaaattcagaacgttttggcaaaaataataaatgaaaattcgactgacgct
agcgtttcaagttcacacagtgagcaagaagggaaatgtgaagtttggaatttccagact
catattgatgaagctatttttgtagcttcaaatatcgtaaaaagaattcagcatgaggat
ataactccccgagacatttgtataattgtaaagcaacaagaacaagtatatgcaagagca
gtaattgaagaacttggacgacaaggagttcacgctagaattgaaaaggaataccaagat
ttgcttgcggaagagtgtgtgcaactaatcgttgatttttttaaactggcaacaatggaa
aaaactcatgagtcatgggtacgggtatcagaattgttagtttatgtgcatgggtatgat
ctggaactggaccatcaaaaaatactaaggatggaattagatcttaatgaacacatttta
caaatgagaagtgttttaaatcaagtatctaacgatgcggaactttgtaagcaacgaatt
gatgaaattgttgaggggattttatcttttataggaaatgaaaagctatttcgactatat
cccaaatactcgaaaggatcatatttcaataagttaaccaaagatactgctgaaaaatta
agcgaggcatacttaaaacatttaaattggattaatagcatagctgattttttagggcta
tttagtgtgcctattatgacaattcataagagtaaagggttggagtatgatacagtcata
ttcttagggctagaagatgatgcattctggacttttagaacacagagactcgctgacatg
tgtgctttctttgttgcactatcaagggctaagaaacaatgtttctttacttttagcaat
tcaagagaaacattacgttttggggacatccaagtaagatcccagtccagtaataatatt
tcatctctatatcagttattgcaagaggctaatgttgatgttagagaatttaataatgtt
taa
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