Paenibacillus sp. IHBB 10380: UB51_12220
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Entry
UB51_12220 CDS
T03836
Name
(GenBank) dimethylallyladenosine tRNA methylthiotransferase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
pih
Paenibacillus sp. IHBB 10380
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pih03016
]
UB51_12220
Enzymes [BR:
pih01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
UB51_12220
Transfer RNA biogenesis [BR:
pih03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
UB51_12220
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
AJS59098
UniProt:
A0A0D3V9T5
LinkDB
All DBs
Position
complement(2824650..2826197)
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AA seq
515 aa
AA seq
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MTKQSKDYSKYFDFSDAKVLSEDEFGKKIRIKGREINIISEPNHRQEKQRGKENVQVIYG
NAVPDELRGLGEGKHYIIYTFGCQMNEHDTETMKGLLEEMGYRSTEDRKVADIILMNTCA
IRENAEDKVFGELGHMMHLKTEKPSLLLGVCGCMAQEENVVNRILQKHGFVDMIFGTHNI
HRLPHLIKEAMFSKELVVDVWSKEGDIIENLPKKREGMRAWVNIMYGCDKFCTYCIVPFT
RGKERSRRPEDVIAEVRDLARQGFKEVTLLGQNVNAYGKDFSDITYSFGDLMDDIRGIDI
PRVRFTTSHPRDFDDQLVQVLAKGGNLVEHIHLPVQSGSTEILKKMSRKYTRASYLELVG
KIKEAIPNVGLTTDIIVGFPGESDEQFEDTMTLVHEVGYDSAFTFIYSPREGTPAAIMED
NVPMEVKKERLQRLNQAIKDNSRMNNEKMCGQVVEVLVEGESKNNDSVLAGRTRSNKLVH
FEGSSDLVGSIVHVKISDAMTWYIKGEIMESVTVN
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgacgaaacaaagtaaggattactctaaatattttgatttctcagatgctaaagtgtta
tctgaggatgagtttggtaagaaaattcgaattaaaggccgggaaatcaacattatatcg
gagcctaaccatagacaagaaaagcaacgtggtaaagaaaatgtgcaagtgatatatggc
aatgccgtcccagatgagctgagagggcttggagagggcaagcattatataatctatacc
tttggttgccaaatgaatgaacacgatacagagaccatgaagggcttgttagaggagatg
gggtatcgcagcacggaagatcgtaaagttgctgatatcattctgatgaacacttgtgca
attcgtgagaatgctgaggataaagtatttggtgaactcggtcatatgatgcaccttaag
acagagaagccaagcttgttactcggtgtatgtggatgtatggcgcaagaggaaaatgta
gttaatcgtattttacaaaaacacggctttgtcgatatgatttttggtactcacaatatt
catagattaccacatcttattaaagaggcgatgtttagtaaggaattagtggttgatgtg
tggtccaaagaaggggacattattgagaatttaccgaaaaaacgtgagggcatgcgagct
tgggtgaacattatgtacggatgcgataaattctgcacctactgtatcgttccattcacg
cgtggtaaagaacgcagtcgccgcccggaagatgtcattgctgaagtaagagacttggct
cgccaaggatttaaagaagtgacactgctggggcaaaatgtaaatgcgtatggtaaggac
ttcagtgatattacttatagttttggggatctgatggatgatattcgagggattgatatc
cctagagttcgctttacgacttcacatccgagggattttgatgatcaactagtccaagta
cttgccaaaggtggcaatttagttgaacatattcacttacccgtgcaatcaggaagtaca
gaaatattgaagaaaatgagtcgtaaatatacgcgtgcgagctatttagagcttgttggc
aaaataaaagaagccattcctaatgtcggattgacaactgatattatcgtaggttttcct
ggtgaaagtgacgaacagtttgaagatacaatgacgttagttcacgaagttggttatgat
tctgcctttaccttcatttattccccacgggaaggtacgccagctgctattatggaagat
aatgtgccgatggaagtgaagaaggaacgtctgcagcgtctaaaccaagcgatcaaagac
aatagtcgtatgaacaatgagaaaatgtgtggacaagtggtagaggttcttgtagaagga
gagagtaagaataatgattctgtcctagcaggaagaacgcgtagcaacaagctggttcat
tttgaaggaagcagtgatctagttggctctatcgtccatgtgaaaataagtgatgcgatg
acatggtacattaaaggtgaaattatggaatccgtaacagtcaattga
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