Paenibacillus sp. IHBB 10380: UB51_12385
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Entry
UB51_12385 CDS
T03836
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pih
Paenibacillus sp. IHBB 10380
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pih03016
]
UB51_12385
Enzymes [BR:
pih01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
UB51_12385
Transfer RNA biogenesis [BR:
pih03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
UB51_12385
Prokaryotic type
UB51_12385
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
CheZ
Motif
Other DBs
NCBI-ProteinID:
AJS59123
LinkDB
All DBs
Position
complement(2860751..2861668)
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AA seq
305 aa
AA seq
DB search
MSELEGILAVYKPAGFTSHDVVAKVRGILCMKRIGHTGTLDPQVTGVLPLCLGKATRVVE
YMQELPKEYQATLRLGMATDTEDLTGQIIEQVDEVSITKEQVEEVLHSFRGVISQIPPMY
SAVKVDGKRLYELAREGKTVERKSREVTIYEIEMTDIRLEGPYPELSFRVLCSKGTYIRT
LCVDIGRMLGLPSVMVKLERTSSAGILAEKCLSFEDIERYMEDGSIHSHLIPVDQAISHL
PAHTVSEDKTSAALQGQRLSYKSVIPEVVHPEPLRLYDSVGRFLGIFQRQEETGAIAAVK
VFLRE
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacttgaaggcattctagcggtatacaaaccggctggcttcacatcgcatgat
gtcgtagccaaagttcgtggaattctttgcatgaagcgtataggtcataccggtacgctt
gatccacaggtaacgggtgtactgcctctttgcctaggtaaagcaactcgggtcgtggag
tacatgcaagaacttcctaaagaatatcaggcgacattacggctcggcatggccacggat
accgaagatttaacaggacaaattatagagcaagtcgatgaagtttctattaccaaagaa
caggtggaggaggtactccactctttccgtggtgttatatctcagattcctccgatgtac
tccgctgtgaaggttgatggtaaacgtctttatgagctagctcgtgaaggtaaaactgtc
gaacggaaaagtcgtgaggtcacgatatacgagatcgaaatgacggatattaggttagaa
ggaccttatcctgaactatcttttcgtgtattatgttctaaaggaacgtatattcggacg
ctgtgtgttgatattggacgaatgcttggcctaccttcggttatggtgaagttagagcgt
acgagctctgcaggtattcttgccgagaaatgtctaagtttcgaggatatcgaacggtat
atggaagatggatcaatccattcacatttaattcctgtggatcaggcgatctcccattta
cctgcgcatacggtatctgaggataaaacatctgcagctcttcaggggcaacggctttca
tacaagtccgtcattccagaagtagttcacccggaaccccttcgtttatacgatagtgtt
ggaagatttcttggtatttttcaaaggcaggaagagacgggagctattgctgctgtgaaa
gtctttttgcgagaataa
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