Paenibacillus sp. IHBB 10380: UB51_13210
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Entry
UB51_13210 CDS
T03836
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
pih
Paenibacillus sp. IHBB 10380
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
UB51_13210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pih03019
]
UB51_13210
03009 Ribosome biogenesis [BR:
pih03009
]
UB51_13210
03036 Chromosome and associated proteins [BR:
pih03036
]
UB51_13210
Enzymes [BR:
pih01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
UB51_13210
Messenger RNA biogenesis [BR:
pih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
UB51_13210
Ribosome biogenesis [BR:
pih03009
]
Eukaryotic type
90S particles
RNase
UB51_13210
Prokaryotic type
rRNA processing factors
UB51_13210
Chromosome and associated proteins [BR:
pih03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
UB51_13210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Lzipper-MIP1
Motif
Other DBs
NCBI-ProteinID:
AJS59264
LinkDB
All DBs
Position
complement(3001875..3002573)
Genome browser
AA seq
232 aa
AA seq
DB search
MSGDLKQLQQQLDIQFHNKLLLKQAFTHASYVNEHRFSQHHDNERLEFLGDAVLELTVSE
YLYNLFPTRPEGELTKLRAAIVCEPSLVKFAVTLEFGQYVLLGKGEELTGGRTRPALLAD
VFEAFIGALYLDQGIEAARKFLDIHVFPQVAASGKQQMSDYKTELQELTQQHNMGLIEYR
IVEERGPAHEREFVSEVYMGNECLGSGSGRSKKEAEQQAAAVALDQLKIKES
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
ttgagtggagatctgaaacagttacagcagcaacttgatatccaatttcacaataagctg
ctattgaagcaggcctttacccacgcatcttacgtcaatgagcatcgattcagccagcat
catgataatgagcgcttggagtttctaggagatgcggtattggagttaacagtatcggag
tatctatacaatctcttcccaactcgtcctgaaggtgaacttactaagcttcgtgccgca
attgtatgcgagccgtcccttgttaagtttgcggtgactctagaatttggacaatatgta
ctgctaggtaaaggtgaagaacttacaggtgggcgtacacgccctgcactattagcagat
gtatttgaagcttttattggagcattgtatctggatcaaggaattgaagcagcaaggaaa
ttcttggatatccatgtgtttcctcaggtagctgcgagtggaaagcagcaaatgagcgat
tacaaaacagagcttcaagaactgacacagcaacataatatggggctgattgaatatcgg
atcgtcgaagaacgaggacctgctcacgagcgagaatttgtttctgaggtgtacatggga
aacgagtgtcttggtagtggaagtggtcgttcgaagaaagaggctgagcagcaagctgca
gcagttgctctcgatcagttgaagattaaggaatcctaa
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