Paenibacillus sp. IHBB 10380: UB51_14265
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Entry
UB51_14265 CDS
T03836
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pih
Paenibacillus sp. IHBB 10380
Pathway
pih03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
UB51_14265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pih03019
]
UB51_14265
03009 Ribosome biogenesis [BR:
pih03009
]
UB51_14265
Enzymes [BR:
pih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UB51_14265
Messenger RNA biogenesis [BR:
pih03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
UB51_14265
Ribosome biogenesis [BR:
pih03009
]
Prokaryotic type
rRNA helicases
UB51_14265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
CMS1
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
AJS59433
UniProt:
A0A0D3VAU3
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All DBs
Position
complement(3221028..3222626)
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AA seq
532 aa
AA seq
DB search
MKTFAEFDLEPRILQAITELGFEESTPIQDQAIPIAMAGRDLIGQAQTGTGKTAAFGIPL
ISKISKEEEKIMALIMTPTRELAIQVAEEIGKIARFKGIRSLAIYGGQDISRQIRSLKNK
PQIIIGTPGRLLDHINRKTIRLNDVQTVVLDEADEMLDMGFMDDIQSILKLVPTERQTML
FSATMPANIQKLAHQFLNNPEHVSVIPKHVTAPLIDQAYIEVPERQKFEALSRLIDMESP
ELAIVFGRTKRRVDELSEALQKRGYSADGLHGDLSQNQRDAVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVINFDLPQDPESYVHRIGRTGRAGKEGTAWSFVTPREMDHFHFIERVTR
HKITRKPLPTTAEAIEGKQRITAERLLETVEKGDLNEYKGIAIQLLEQFDSVQLLTAAMK
LLTGEKKDSEIQLTPEDPMRAKRRKPDIRSGRKPSGSYGSRSGSGGSSSGGGYRGNRDSG
SSNRGGYGGNKSSYSKDGGAGSSSRPKPRPSSNGSSASSSRPTKRPESSYDN
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaacattcgcagaatttgacttggagcctagaattcttcaagcgatcacggagcta
ggatttgaagaatccacgcccattcaagatcaagccattccaattgcaatggcaggtaga
gatttaattggtcaagcacaaacaggtacaggtaaaacagcagcgttcggtattcctttg
atttctaaaatcagtaaggaagaagaaaaaattatggctcttatcatgacgccaactcgt
gaacttgctattcaggtagctgaagaaattggtaaaattgcccgtttcaaaggcattcgt
tcgttagctatttacggaggacaagatattagtcgtcaaatccgttccctaaaaaataaa
cctcagattattattggtacgccaggtcgtctacttgaccatattaaccgcaaaacgatt
cgtttaaatgatgttcaaaccgtcgttctagatgaagctgatgaaatgcttgacatgggc
ttcatggatgatatccaatccatcttgaagttggttccaacagaacgtcaaacgatgctt
ttctccgctacaatgccagccaacattcagaagcttgctcatcaattcctgaacaatcct
gaacacgtatctgtaattcctaagcatgttactgctccacttattgatcaagcctacatc
gaagttcctgaacgccaaaaattcgaagctcttagtcgtttaatcgatatggaatctcct
gaacttgcgattgtttttggacgtacaaagcgtcgtgtagatgaattgtctgaagctttg
caaaaacgtggatattcagcagatggtcttcatggagatttgtcacagaaccaacgtgat
gctgtaatgcgtaaattccgtgatggaagtattgatgtattggtagcaacagatgttgct
gcacgtggactagatgtttctggtgtaacgcatgtaattaacttcgatttaccacaagat
ccggaaagttatgtacaccgtattggtcgtactggacgtgctggtaaagaaggtacagct
tggtctttcgtaacgcctcgtgaaatggatcatttccactttatcgaacgtgttacacgt
cacaaaattacacgtaagcctcttcctactacagcagaagcaatcgaaggaaaacaacgt
attactgcagaaagattgcttgaaactgttgagaagggcgatcttaatgaatataaaggt
atcgctattcaattattagaacagtttgattctgttcaattgttgacagcagcaatgaag
ttgcttacaggagagaagaaggattccgagatccaactaactccagaagatccaatgcgt
gctaagcgtcgcaaaccggatattcgtagtggacgtaaaccatcaggtagctatggttcc
cgtagtggatctggtggaagcagcagtggtggtggataccgtggtaaccgcgatagtggt
agtagtaatcgtggtggatatggtggtaacaagagtagctatagtaaagatggtggagct
ggttcttctagtcgcccgaaaccacgtcctagtagcaacggtagcagcgcaagcagcagt
cgtcctactaaacgtcctgagagcagctacgataactaa
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