Paenibacillus sp. IHBB 10380: UB51_15115
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Entry
UB51_15115 CDS
T03836
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pih
Paenibacillus sp. IHBB 10380
Pathway
pih03030
DNA replication
pih03410
Base excision repair
pih03420
Nucleotide excision repair
pih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UB51_15115
03410 Base excision repair
UB51_15115
03420 Nucleotide excision repair
UB51_15115
03440 Homologous recombination
UB51_15115
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pih03032
]
UB51_15115
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_15115
Enzymes [BR:
pih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UB51_15115
DNA replication proteins [BR:
pih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
UB51_15115
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
UB51_15115
NER (nucleotide excision repair)
GGR (global genome repair) factors
UB51_15115
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
ZSWIM1-3_RNaseH-like
Motif
Other DBs
NCBI-ProteinID:
AJS59575
UniProt:
A0A0D3VBY1
LinkDB
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Position
complement(3390836..3393499)
Genome browser
AA seq
887 aa
AA seq
DB search
MDKLILIDGNSIIYRAFFAMPPLTNTKGLHTNAVYGFTTMLLRLIEDYKPTHMMVAFDAG
KVTFRHSDYQDYKGGRQKTPPELSEQFPLLKELLRGFGIAQFELAGYEADDIIGTLSLEA
DQAGRQVMVITGDKDMFQLASDNVQVGLTRKGVTEIELYTPESIQERYGLQPHQIIDLKG
LMGDPSDNIPGVPGVGEKTALKLLHQYGSVEEVLANTHELKGKMKEKIETHADDATLSKK
LATIFREVPLDESLDDMTFSGLKEETAGPAMAKLEFKSLLERLSFSAGHAEGEEGTVAQP
AINVEVTVITENNMNELIERLPEVQVLHVETHGDNPHRADVIGMVLSTEDRHYYIPFDLV
KSSQAQPIVNWLQDADAPKRGYDLHRMDLALHWHGVPFAGASFDVQLAAYILDPTEANQT
VSDLASKYGLSFMVADEDVFGKGAKYKVPDTDILSKHLASKTATLLNIIPKQELALSENE
MSSLFHDLEMPLSRILADMEKQGIAVHTEELQQLGKEFEEQINGLTEQIYSIAGIEFNLN
SPKQLGEILFVKLGLPVIKKTKTGYSTDAEVLEKLAPYHDIVQLILKYRTLAKLQSTYVE
GLLKEISPQTGKVHTYYRQTIAATGRLSSQFPNLQNIPIRLEEGRKIRKVFVPSEPGWSI
LAADYSQIELRVLAHISDDERLKDAFIHDMDIHTKTAMDVFGVKAEEVGADMRRSAKAVN
FGIVYGISDYGLSQNLNIPRKEAAKFIEQYFEVFQGVRKYMDDIVKVAKNDGYVTTLLGR
RRYLPEINASNFNIRSFAERTAMNTPIQGTAADIIKLAMVHMDQALADRELKSRMLLQVH
DELVFEVPADELETMKFLVPEIMGQALKLVVPLKSEVSFGMNWYEAK
NT seq
2664 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttaattcttattgatggaaatagtatcatttatcgtgcattttttgcaatg
ccaccacttacgaataccaaggggctacatacgaatgccgtatatggttttacaacgatg
cttttgcggcttattgaagactataaaccgacgcatatgatggttgcctttgatgcaggg
aaagtcactttccgacatagcgactatcaggattacaaaggggggcgtcaaaagacacca
cctgagctatccgaacaatttccattgcttaaggaactattgcgtggattcgggattgct
caatttgagcttgctggatatgaagctgatgatattatcggtacgctctccttagaagcg
gatcaggcaggacggcaggtcatggtcatcacgggggacaaggatatgttccagctagcg
tctgataatgttcaggtcggcctgactcgtaaaggagtgacagagattgaactctacaca
ccagagagtatccaagaaaggtatggtttacaacctcatcaaattattgatttaaaaggg
ttaatgggtgatccttcagataacattccgggtgtaccgggcgttggagagaagacagca
ctcaagttactacatcaatacggatcagtagaggaagtacttgcgaatacgcatgaactg
aagggcaaaatgaaagagaaaattgagactcatgccgatgatgcaacgctcagcaagaaa
ctggctacaattttccgtgaagtgccactagatgagtcactggatgatatgacatttagc
ggcctcaaggaagagacggcaggtccagccatggccaagttagaatttaaatcactgctt
gaacgtttatctttctcagctggtcatgcagagggtgaagaagggacggttgcccagcca
gccataaatgttgaagttacagtcattacagaaaacaatatgaatgaattgattgaacgt
ttaccagaggttcaagtgttacatgtggagactcatggcgataatccgcatcgtgcagat
gttataggcatggtattgtccacagaagatcgacattattatattccctttgatcttgtg
aaatcgagtcaagcccagccgatcgtgaactggttacaagatgctgatgcaccgaaacga
ggatatgatctacatcggatggatctcgcgttacattggcatggtgtaccttttgcaggg
gcttctttcgatgtgcagcttgcggcatatatcctcgatcctaccgaggctaaccagacg
gtaagtgacttggcatccaaatatggtttatcgttcatggttgctgatgaggatgtgttt
ggcaaaggtgcgaaatataaggtgccagatacggacattctaagcaagcatcttgcaagc
aagacggctacgctactgaacatcattccgaagcaggaattagctctaagtgagaatgag
atgagttcattgtttcatgatcttgagatgccgttatctcgtatcctggcagatatggag
aagcagggtattgctgttcataccgaggaattacagcagttgggtaaggaatttgaagag
cagatcaacggactaacggaacaaatttatagtatcgcaggcattgaatttaatcttaat
tcgcctaagcaactcggagaaattctgttcgtgaagttaggtttacctgtcattaagaaa
acaaaaacgggttattccaccgatgcggaagtgctggagaagctagctccttaccatgat
attgttcagctgatattgaaatatcgtaccctggcgaagttacagtctacatatgtagaa
ggtcttctgaaagagatatcaccacagacgggtaaagtgcatacgtattatcggcagacc
attgctgcaacaggcagacttagcagtcaatttccgaatcttcagaacattccgattaga
cttgaagaagggcgcaaaatacgtaaagtattcgtaccttctgaaccgggatggtccatt
ttggcagccgattattcacagatcgaactgcgtgtgttagctcatatatcagatgatgaa
cgcttaaaggatgcattcatccatgatatggacattcatacgaagacggcaatggatgtg
ttcggagtgaaggcagaagaggtaggcgctgatatgcgtcgctcggccaaagcggttaat
ttcggtattgtatatggaattagtgattatggactgtcacagaacctcaatattccacgc
aaagaggctgctaaatttattgaacagtattttgaagtgtttcaaggtgtgcgtaaatat
atggatgatatcgtaaaagtagccaaaaacgacggttacgtcacaacgttattgggaaga
cgacgttatttaccagagattaatgcaagtaacttcaatatccgctcctttgctgaacgg
acggcaatgaatacgcctattcaaggaacggctgcagacattattaagctggctatggta
cacatggatcaggcgctcgcagatcgagaattgaaaagccgcatgctgcttcaagtacac
gatgaattagtatttgaagttcctgcggatgagctggagactatgaaatttttggtaccg
gaaatcatgggccaagcattaaaacttgttgtaccgttgaaatcggaagttagctttgga
atgaactggtatgaggctaaataa
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