Paenibacillus sp. IHBB 10380: UB51_15210
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Entry
UB51_15210 CDS
T03836
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pih
Paenibacillus sp. IHBB 10380
Pathway
pih03030
DNA replication
pih03430
Mismatch repair
pih03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
UB51_15210
03430 Mismatch repair
UB51_15210
03440 Homologous recombination
UB51_15210
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pih03032
]
UB51_15210
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_15210
Enzymes [BR:
pih01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
UB51_15210
DNA replication proteins [BR:
pih03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
UB51_15210
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
UB51_15210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
DNA_pol_IIIA_C
DUF6282
Motif
Other DBs
NCBI-ProteinID:
AJS59592
UniProt:
A0A0D3VD36
LinkDB
All DBs
Position
complement(3412387..3416019)
Genome browser
AA seq
1210 aa
AA seq
DB search
MASFVHLHVHSEYSLLDGAARITDLVQQAADYGMTSLALTDHGVMYGAVPFYKACKAKGI
KPIIGCEAYFTSGSRKERGSRKDQPIHHLILLAKNEIGYRNLMRLCSIGHLEGFHYKPRI
DLESLRNYSEGIICLSACLGGEVPQHLLHGRYEEARKAALRYQEIFGEDFYLELQDHGLP
EQKRVNPSLVQLSEETGIPLVATNDVHYLQREDAEMQDVLICIGTGKNVEDEQRLRMPTD
QLYFKSGEEMTRLFPHIRQALDNTLAIADKCHLELEFGKYILPEFNPIPDDLTSAMYLRH
LCQKGLEQRYQGTIRWNEPETKTELEQRLSYELGVIENMGFADYFLIVWDFIAYSHKKGI
VVGPGRGSSAGSLVAYVLQITNVDPMKYNLLFERFLNPERISMPDIDIDFSDERRDEVIE
YVVDKYGKDHVAQIITFGTMAAKAAVRDVGRVLNVPYGEVDRAAKLIPTQLGIHIHRAIE
LNEELKKLHDAGGRISNMLDMAMKVEGMPRHASTHAAGVVISRDPLTDVVPLQVGSEKTA
LTQYSMEHLESIGLLKMDFLGLRTLSIIERSMKWIKEMTGNVPDFDHIPDNDTLTYDMLG
RGDTTGVFQLESTGMRRVLKDLKPSEFEDIISVLALYRPGPMEFIPKYIQAKHGLLEVEY
PHEDLKPILKDTHGIIVYQEQIMQIASLMAGFSLGESDLLRRAVSKKKREVLDRERGHFV
EGSLNQGYVEEEANRVYDMIVRFADYGFPRAHAAAYGVLAFQTAYLKAHYPVQFMASMLT
AVMGSHRKVAEYVLECRRMEIGVLSPNVNESGVLFTPVQGNIRFGLGAVKNVGTQAVENI
ILIREEKPFESLLDFCRRIDLRVCNKRVIESLIQAGAFDSLPGHRAQLLAMLDETVDAAL
KWRKERDDLQIQLFDFVESANWNIEYPDIPLFTGAQQLELERELLGLYLSGHPLDDYDLL
INEAGVDRLMDLSEVPDDSRVIVAGMIVSTKIIMTKQGKAMAFMDIEDQIERCEVVLFPE
TWKKSASSIEKGALLGLRARVQQQDEGFKLLAEEVLPLDATALQQLVKRGASTRTAPTAI
SRKTMSSIQPKVMDKVVEVSPSSINQTSMENAPKVASTLTQAAPNNVKQQDKAAVERRVF
VKIGAQAENPELLTRLKILLQEHPGSVATVLFYEQSQKLLALSDQYRIEPSDELIHEMEQ
MLGDGSVRIK
NT seq
3633 nt
NT seq
+upstream
nt +downstream
nt
atggcttcttttgttcatcttcatgttcatagtgaatatagtcttctggatggagcagca
cgtataacagaccttgtgcagcaagctgccgattacgggatgacctcactagcactgacg
gatcatggagtcatgtatggcgctgttccgttctataaagcatgtaaggctaaagggatt
aagcctattattggttgcgaagcttatttcacttcaggttcacgtaaagaacgaggcagc
cgtaaggatcagcctattcatcatttaatattgttagctaagaatgagatcggttaccgt
aatttgatgagattatgctcaattgggcatttagaaggttttcattataaacctagaata
gatttagaatcgctcagaaattatagcgaaggtattatttgtcttagtgcttgtcttgga
ggagaagttccccagcatttattacatggacggtatgaagaggcgcgtaaggcggcactt
cgttaccaagaaatattcggcgaggatttctatcttgagttacaggatcatggattacct
gagcaaaagagagtcaacccgagcctagttcaactcagtgaagagacaggaatcccactc
gtagcgacgaacgatgtacattatctccagcgagaggatgcagaaatgcaggatgtatta
atctgcattggtactggcaagaacgttgaggatgaacagagactgcgaatgcccacagat
cagttatatttcaaaagtggggaggaaatgacccgcttgtttccgcatattcggcaggct
cttgataacacacttgccatagcggataaatgtcatttagagcttgagtttgggaaatat
attctacctgaatttaatcccattccggatgatctgacttcagctatgtatttacgtcat
ttgtgtcaaaagggacttgagcaaaggtatcaaggaacgattcgttggaacgagccggag
actaagacagagcttgaacaacgtctctcttacgagcttggtgtgattgagaacatggga
tttgcggattacttcctcattgtgtgggattttatcgcatattcgcataaaaaggggatt
gtcgttggcccgggacggggttcttcagcggggagtctcgtggcgtatgtgcttcagatc
acgaatgttgatcctatgaaatataacttactcttcgaacgttttcttaaccctgaacga
atcagtatgccagatatcgatatcgatttcagtgatgaacggcgcgatgaagtgatcgaa
tatgtcgttgataaatatgggaaagatcatgtggctcagattattacattcggaacgatg
gctgcaaaggctgcggtaagagacgtaggacgagtactgaatgtgccctatggagaagta
gatagagcagctaagcttattccaactcaattgggtattcacattcatcgtgcgattgaa
ctgaatgaagagctgaagaagctgcatgatgcaggcggtagaatcagcaatatgttggat
atggctatgaaggttgaaggaatgcctcgccatgcttctacacatgccgcaggtgtcgtg
atctcacgtgatcctttaacggacgtagtccctttacaagtcggcagtgagaagacagcc
ttaacccagtattcgatggaacatctggagagtatcgggttgttgaaaatggactttcta
ggattaagaactctttctattattgaacgttccatgaaatggattaaagaaatgacaggg
aatgtgcctgatttcgaccatatccctgataatgatacactcacgtatgacatgctagga
cgtggagatacgacaggggtattccagcttgaatccaccggaatgaggcgtgtattgaag
gatcttaagccctcagaattcgaagatatcatatctgtgctagctctgtatcgtccagga
ccgatggaattcattcctaaatatattcaggccaagcatgggctactagaagtggagtat
ccgcatgaagatctaaagcctattcttaaggatacgcatggcatcatcgtatatcaggag
cagattatgcaaatcgcttctcttatggctggtttctcgcttggagaatcggacctgttg
cgacgcgccgtctcaaagaagaaacgcgaagtgcttgaccgagagcggggtcacttcgtc
gaaggaagccttaatcaagggtatgtggaagaagaagctaatcgtgtatacgatatgatc
gtcaggttcgctgattacggatttccacgtgcccatgctgctgcatatggtgtattggca
ttccagaccgcctatctaaaggcacattatccagtccaattcatggcatctatgctgact
gccgtaatgggaagtcatcgtaaagtagctgaatatgtgctggagtgtcgccgaatggag
attggcgttctctcacctaatgtgaatgaaagtggtgtgctcttcacaccggtacagggg
aatattcgatttggactgggcgcagttaaaaatgtcggtactcaggctgtagagaatata
attctgattagagaagagaaaccattcgagagtcttttggatttctgtcggcgtattgat
ctacgcgtatgtaataaacgtgttattgaatctttgattcaggcaggtgcatttgactca
ttacctggccatagggcgcagctgctagcgatgttggatgagaccgtcgatgccgctttg
aagtggcgtaaagaacgagatgacttacaaattcaattgttcgatttcgtagaaagtgcg
aattggaatattgagtatcctgacattccattatttactggagctcagcagctcgaatta
gaacgtgaattactcggtttatatctttcagggcatcccttggatgattatgatctttta
ataaatgaagcgggtgtagatcgcttaatggatcttagtgaagtgcctgatgattcgaga
gtaatcgttgcaggaatgatcgtctcgacgaagattattatgacgaaacaaggtaaagcg
atggcattcatggatatagaagaccagattgagcgctgtgaagtagtgctcttccctgag
acatggaagaagagtgcatcatcgattgagaagggggccttgcttggactacgagctaga
gtgcagcaacaagatgagggctttaagctactagcagaagaagttctacccttagatgca
actgctttacagcaattggtgaaacggggggcgtcaactcgaactgcacccacagctata
tccagaaagacgatgtcctctatacagccaaaagtcatggataaggttgttgaagttagt
cctagttctatcaaccaaacgtctatggagaacgctcctaaggttgcttccaccttgact
caagctgcacctaataatgtgaaacagcaggataaggcggctgtagaacgtcgtgtattt
gtcaagattggagcacaggcagagaatcctgagcttcttacacgcttgaagatactacta
caggagcatccaggttctgtcgcgacggtattgttctatgaacaaagtcagaagttgcta
gcgctcagtgaccaatatcgtattgagccatctgatgagcttatccatgagatggagcaa
atgttaggcgatgggtcggtacgaataaagtaa
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integrated database retrieval system
