Paenibacillus sp. IHBB 10380: UB51_19720
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Entry
UB51_19720 CDS
T03836
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
pih
Paenibacillus sp. IHBB 10380
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_19720
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
UB51_19720
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DUF7125
AAA_22
Lon_C
DnaB_C
nSTAND_NTPase5
AAA_16
NTPase_1
divDNAB
AAA_24
AAA_14
nSTAND3
Rad51
KdpD
AAA_5
AAA
ADH_zinc_N
SLFN-g3_helicase
DZR
Glyco_transf_N
Motif
Other DBs
NCBI-ProteinID:
AJS60308
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Position
complement(4313828..4315195)
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AA seq
455 aa
AA seq
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MAKGKTKFFCSECGYETPKWYGKCPGCQAWNSMVEESTVVVKTQGMNSSIFQSKEKPLSI
INIESSKEDRVDTGIGELNRVLGGGIVPGSLVLVGGDPGIGKSTLLLQTSHSLSISGLRV
LYISGEESVRQTKLRADRLGALSPELYVLCETNMEAIEEAIESIQPQFLVIDSIQTVYLP
EVTSAPGSVSQVRECTARFMRVSKGMGIATVLVGHVTKEGAIAGPRMLEHMVDCVLYFEG
ERHHTYRLLRAVKNRFGSTNEIGIFEMGEVGLTEVENPSELFLSERPLGVAGSTVVASVE
GTRPVLVELQALITPTHFPSPRRMCTGIDHHRMGLIIAVLEKRMGMFLQNQDAYLNVAGG
VKLDEPAVDLAIAVSIASSFRDLPTKPYDVFFGEVGLTGEVRGVSRAEQRVKEAEKLGFK
RVILPEKSLKGWKHPKGIELVGVTTVAKALSVALD
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaggtaaaacaaagtttttttgtagtgaatgtggatatgaaactccaaaatgg
tatggtaaatgcccggggtgtcaggcttggaattcaatggtagaagagtctacggtagtc
gttaagacacaaggcatgaattcttctatttttcagagtaaagaaaagccgctctccatc
ataaatatagagagcagtaaagaagacagagtggataccggtattggtgaattgaatcgg
gtattaggtggaggcattgttccaggttcacttgttctagtaggtggtgatcccgggata
ggaaagtcgactttattacttcaaacttcacattctttatcaatatcaggcctacgggta
ctttatatatcaggggaagaatcggtacgacaaacgaaattacgcgctgatcgattaggt
gcgctctctcctgagctgtacgtattatgtgaaacgaatatggaagctatagaagaagct
attgaaagtattcaacctcaatttttagttattgattctattcagactgtttatttacct
gaagtcaccagtgcaccaggtagtgtatctcaagtaagggaatgtacagctcgatttatg
cgtgtctctaaaggtatgggtattgctacggtattagtgggtcatgtgaccaaggaaggt
gctattgcaggacctagaatgcttgagcacatggtagactgcgttctttattttgaagga
gaacgtcatcatacttatagattgctgagagccgttaagaatcggtttggctcaacgaat
gaaattggtatttttgaaatgggtgaggtggggttaactgaggtagagaacccatcagag
ctatttctctcagagcgtccccttggcgtagctggttcaacagtcgtggctagtgtcgaa
ggaacaaggcctgtactcgtggagttgcaggcactgattacacctactcattttccatcc
ccaagacgcatgtgtaccggaatagatcatcatcgaatgggactcattattgctgtatta
gagaaaagaatgggcatgtttcttcagaatcaagatgcttatctaaacgttgcgggtggt
gtgaagcttgatgaacctgcagtagatttggcgattgcagtcagcattgcctccagtttt
cgcgatttaccgacaaaaccctatgatgtcttttttggagaagtgggattaacaggggaa
gtcagaggtgtatctcgtgccgagcaacgggtgaaggaagctgagaagttagggtttaag
agagttattttaccggagaaaagcttaaaaggatggaagcatcccaaaggaatagaactt
gtcggagttactactgtagcaaaggcattatcggttgcgttagattag
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