Paenibacillus sp. IHBB 10380: UB51_19790
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Entry
UB51_19790 CDS
T03836
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pih
Paenibacillus sp. IHBB 10380
Pathway
pih03420
Nucleotide excision repair
pih03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pih00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
UB51_19790
03430 Mismatch repair
UB51_19790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pih03400
]
UB51_19790
Enzymes [BR:
pih01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
UB51_19790
DNA repair and recombination proteins [BR:
pih03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
UB51_19790
MMR (mismatch excision repair)
Other MMR factors
UB51_19790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_11
Viral_helicase1
AAA_30
ResIII
DEAD
Terminase_6N
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AJS60317
LinkDB
All DBs
Position
complement(4332110..4334431)
Genome browser
AA seq
773 aa
AA seq
DB search
MQPIDIYEAISKLNPPQQQAVEATDKPLLIMAGAGSGKTRVLTHRIAYLIATRKAPPWAI
LAITFTNKAAREMQERVSKLVGREGRDIWVSTFHSMCVRILRKDIERIGFSSSFSILDST
DQLSVIRNCMKELNIDTKKFEPKAIQALISSAKNELLTPEQFEQKAGDYFEELAAKVYRM
YQRRLKNNNSLDFDDLIMTTIQLFKEVPEVLDFYQKKFQYVHVDEYQDTNKAQYMLCRML
AEGHHRICVVGDSDQSIYRWRGADISNILNFEEDYPEARTIFLEQNYRSTSNILNAANEV
INKNTGRKPKKLWTDKGEGPKIKVYRADSEHDEGYFVASEISKNVKNGQSYQKHAILYRT
NAQSRVVEEILIKSDIPYQIVGGIKFYDRKEIKDLLGYLKLLSNPDDDISLTRIINVPKR
AIGDTTVAKLAAAASEKGTSIFRVLQFVDDLGFAGRTRNALVGFYDMIASLHQMVEYLSV
TELTEKILELSEYRRELENEKTLESRSRLENIEEFLSVTMEFEKNNDDKSLVSFLTDLAL
IADIDKVNDDPEEESDAVILMTMHSAKGLEFPVVFIVGMEEGVFPHSRAFMDNEELEEER
RLAYVGITRAEQQLFLSCAKMRTLFGRTTANAPSRFLEEIPEELKEDTLMENDRYKRGAN
GGGSYGGRGLGSGGGSNFGRSASNSSLSGSTASAAKSRVTVTTSGPQRTVEAGSSSDPAT
LKAGDKVSHGKWGIGVIVSIKGSGNDTELQIAFPAPVGVKRLLAGFAPITKVE
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccgattgacatatatgaagcaatctcaaagctcaatccaccgcagcaacaggct
gttgaagctacagacaagcctttattgattatggcaggggcgggaagtggtaagacgagg
gtgttaacacatcgaattgcttacctgattgcaacacgcaaagctccaccgtgggctatt
ttggcgattacctttacgaacaaagcagcgagagaaatgcaagaacgggtatctaagcta
gtgggaagagaaggaagagacatttgggtgtcaacctttcactccatgtgtgtgcggatt
ctgcgtaaagatatcgaaagaattggattctcttccagcttctccattctagattctaca
gaccagctttccgtgatccgtaattgtatgaaagaactgaatatcgacactaagaaattt
gagcctaaagcgatccaagccctcattagctcagccaagaatgaattgcttactcctgag
cagttcgagcagaaggcgggcgattatttcgaggaattagcagctaaagtgtacagaatg
tatcaaagaagactgaagaacaataactccctcgattttgacgacttgatcatgaccacg
atccaactatttaaagaagtaccagaagtactcgatttctatcaaaagaaattccaatat
gtccatgtggatgaatatcaggatacgaacaaagcacaatatatgctatgccgtatgtta
gctgaaggccaccaccgtatttgtgtcgtaggggatagtgatcagtcgatttatcgctgg
cgtggagcggatattagtaacatccttaactttgaagaagattaccctgaggcacgcacg
atcttcttggaacagaactatcgttccacttcaaatattctgaatgcggctaatgaagta
atcaataagaacacagggcgtaaaccgaagaagctgtggacagataaaggcgaaggcccg
aagatcaaagtttaccgtgcagactccgaacatgatgaagggtatttcgtggcctcagag
attagtaaaaatgtgaagaatggtcagtcctatcagaaacatgctattctgtaccgcacg
aatgctcagtcccgggtggtagaggaaattctgatcaaatcagatatcccttatcagatt
gtaggaggaattaagttctacgatcgtaaagagatcaaggatttattaggttatttgaag
ctactatctaatccagacgatgacattagtttaacaagaattattaacgtccccaaaaga
gctataggggatacgacagttgctaaactagcggcagccgcatctgagaaaggaacatct
atctttcgggtgttacagtttgtagatgatcttggttttgccggacggacgcgtaacgca
ctcgttggtttttacgatatgattgcttctttacatcaaatggtggaatatttatctgtt
accgaattaacagagaaaatacttgaactgtcagagtatcgccgtgaacttgagaatgaa
aaaacgcttgaatctcgttcaaggttggagaatatcgaggaattcctatctgtaacgatg
gaatttgagaagaacaatgatgataaatcactggtttcctttttgactgatttggcgttg
attgcagacatagataaagtgaatgatgatcctgaggaagaaagcgatgctgttattcta
atgacgatgcatagtgccaagggacttgaatttcctgtcgtatttattgttgggatggag
gaaggcgtattcccacacagtcgtgcttttatggacaatgaagagcttgaggaagaacgc
cgtcttgcttatgtagggattacacgtgcagagcaacaactcttcctttcctgtgctaag
atgagaaccttatttggacggacaacagcgaacgcaccttcccgctttctagaagaaatt
ccagaagagttgaaggaagataccttaatggaaaatgaccgttataaacgaggggcgaac
ggtggaggttcatatggaggacgaggtctaggtagtggtggaggaagtaactttggacgt
agtgcatcgaattcatctctaagcggatcgaccgcctcagcggcaaagagtagggttaca
gtcaccacatctgggccacaacgaacggttgaagcaggaagttcatctgatccagccaca
cttaaagcaggagataaggtatctcacggcaaatggggaattggcgttatcgtttcaatc
aaaggaagtggcaacgatacggagctgcagattgcatttccagcacctgtaggtgtgaaa
cgtctgttagccggttttgcaccgattactaaagtagagtaa
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