KEGG   Paramuribaculum intestinale: NF347_04320
Entry
NF347_04320       CDS       T09294                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
pii  Paramuribaculum intestinale
Pathway
pii03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pii00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NF347_04320 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pii03400]
    NF347_04320 (uvrB)
DNA repair and recombination proteins [BR:pii03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NF347_04320 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NF347_04320 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII DEAD UVR Kinesin AAA_30 UB2H SLFN-g3_helicase EAD4 Microtub_bd AAA_16 DUF87
Other DBs
NCBI-ProteinID: WLT42775
LinkDB
Position
complement(980074..982173)
AA seq 699 aa
MDFRLASEYSPTGDQPRAIKELVEGINQGLPAQTLLGVTGSGKTFTMANVIKEVKRPTLI
LSHNKTLAAQLYSEMKNFFPDNAVEYFVSYYDYYQPEAYIPSVDKYIEKDLMINDEIDKL
RLATTSALLSGRQDVIVVSSVSCIYGMGNPEDFNSNVIEAYRGRKVSRNAFLRELVGALY
SRNEMELGRGNFRVKGDTVDIYLAYEEIVVRVTFWGDEIESVSSYYPRDNVVLGKHDSFK
IFPANIFVTSPQRMASGIAQIELDLGEQVGFFNREARELEAKRLYERVTYDVEMMREVGH
CPGIENYSRYFDGRQPGMRPFCLLDYFPDDFLTIIDESHVTVPQIRAMYGGDVSRKMNLV
EYGFRLPAALDNRPLKFEEFESLTKQVVYVSATPADYELEKSEGVVVEQLIRPTGLLDPI
IEVRPSLNQIDDLMEEIQLRIERQERVLVTTLTKRMAEELNDYMTKLKIKTAYIHSDVDT
LDRIRILDDLRAGVYDVLIGVNLLREGLDLPEVSLVAILDADKEGFLRSHRSLTQTVGRA
ARNLGGRVIMYADKITDSMQLTIDETNRRRQIQLAYNEEHGITPQAIVKARNRIIGVDTG
DDDTASQSAGSRSGKPAAKSSRRDGQASKVIYENEYTAQVDIAADPVIPYMTCEELQRSI
TRKRMEMVEAAKRMEFIEAARLRDEVLKMEQLLKEKEEA
NT seq 2100 nt   +upstreamnt  +downstreamnt
atggatttcagacttgcatcagaatacagtccgaccggcgaccagccgcgtgcgataaag
gagcttgtggaaggcatcaatcagggactgccggcccagacattgcttggagtgacaggc
tcgggcaagaccttcaccatggccaacgtcataaaggaggtgaagcgtccaaccctgata
ctaagccacaacaagactctggcagcacagctctacagcgagatgaagaacttcttcccg
gataatgcggtggaatacttcgtatcgtattacgactattatcagcccgaagcgtatatt
ccgtcggtagacaaatacatcgagaaagatctgatgatcaacgacgagatcgacaaactg
cggctggccacgacatcggctctgctgtcaggacgtcaggacgtgatagtcgtcagctct
gtgtcgtgcatctacggcatgggcaatccggaggacttcaacagcaatgtgatcgaggca
taccgcggccgcaaggtgagccgcaacgcctttcttcgcgagcttgtaggcgccctctac
agccgtaacgagatggagcttggtcgaggcaatttcagggttaagggcgacacagtcgac
atatatctggcctacgaggagatcgtggtgcgtgtcaccttctggggcgacgagatagag
tcggtgtcaagctattatccgcgcgacaatgtggtgctcggcaagcacgattcattcaaa
atattcccggccaacattttcgtcacctctccgcagcgcatggccagcggcatagcacag
atagaacttgaccttggagaacaggtgggctttttcaaccgcgaagcccgcgagctggag
gccaagcgcctatatgagcgtgtcacctacgacgtggagatgatgcgcgaggtgggacac
tgccccggcatcgagaactacagccgttattttgacggccgtcagccgggcatgcgtccg
ttctgcctgcttgattatttcccggacgatttcctcaccatcattgacgagagccatgtg
acggtgccacagatccgggcgatgtatggcggcgatgtgtcgcgaaagatgaatcttgtg
gaatacggtttcagactgcctgcggctctcgacaaccgcccactgaaattcgaggagttc
gagtcgcttacgaaacaggtagtgtatgtcagcgccacccctgccgactatgagcttgag
aagagcgagggcgtggtggtagaacagcttatccgccccaccggtctgctcgacccgata
atagaggtcagaccgtcgctcaaccagatcgacgatctgatggaggagatacagcttcgc
atcgagcgtcaggagagagtgctggtgaccacgctgacaaagcgtatggccgaagagctc
aacgactatatgactaagctgaagataaagactgcctatatacacagcgatgtggatact
ctcgaccgtataagaatactcgacgatctgcgtgcaggcgtctatgacgtattgatcggc
gtgaatctgttgcgcgagggtcttgatctgccggaggtatcgctggtggccatactcgac
gccgacaaggagggtttcctgcgttcccaccggtcgctgacacagaccgtaggccgtgcc
gcacgtaatctcggcggccgcgtgataatgtatgccgacaaaatcacagacagcatgcag
ctgaccattgacgaaaccaaccgccgccgacagatacagctggcctataacgaggagcac
ggcataactccgcaggcgatagtcaaggcccgcaaccgcataatcggggtggacaccggc
gatgatgacacggcatcgcagagcgcaggatcacgctcgggcaagccggcagccaaaagc
tcgcgccgcgacggccaggcgtcgaaagtcatttatgagaatgaatacaccgctcaagtc
gacattgccgccgatccggtgataccctatatgacgtgcgaggagcttcagcggtccatc
acccgcaaacggatggagatggtcgaggccgccaaacggatggaattcatcgaagccgcc
cgtttgcgtgacgaagtgttgaagatggagcaactgttgaaagaaaaagaggaagcgtga

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