Paramuribaculum intestinale: NF347_04560
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Entry
NF347_04560 CDS
T09294
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pii
Paramuribaculum intestinale
Pathway
pii00260
Glycine, serine and threonine metabolism
pii00460
Cyanoamino acid metabolism
pii00630
Glyoxylate and dicarboxylate metabolism
pii00670
One carbon pool by folate
pii00680
Methane metabolism
pii01100
Metabolic pathways
pii01110
Biosynthesis of secondary metabolites
pii01120
Microbial metabolism in diverse environments
pii01200
Carbon metabolism
pii01230
Biosynthesis of amino acids
pii01240
Biosynthesis of cofactors
pii04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
pii00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NF347_04560
09102 Energy metabolism
00680 Methane metabolism
NF347_04560
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NF347_04560
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NF347_04560
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NF347_04560
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NF347_04560
Enzymes [BR:
pii01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NF347_04560
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WLT42818
LinkDB
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Position
complement(1033347..1034627)
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AA seq
426 aa
AA seq
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MEKDSVIFDLIEREHQRQAKGIELIASENFVSDEVMQAMGSCLTNKYAEGYPGHRYYGGC
GVVDEVEQIAIDRAKELFGAEYVNVQPHSGAQANMAVFMACLKPGDKFLGLNLSHGGHLS
HGSPVNFSGLMFQALEYNVSAETGLVDYDQMEEVARRERPALIIGGASAYSREWDYARMR
RLADEIGALLMVDMAHPAGLIAAGLLDNPLRHAHIVTTTTHKTLRGPRGGMILLGKDFPN
PWGKTTPKGQVRMMSSLLDMAVFPGTQGGPLEHVIAAKAVAFGEALKPEFKAYQQQVLTN
ARAMAEALTRRGYKIVSGGTDNHCVLVDLRTKFPDLTGKVAERALVDADITANKNMVPFD
SRSPFQTSGIRFGTPAITTRGVKEDQMDTIVELIDTVLSDPENQEVIAAVRNRVNAMMEK
YPIFAY
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaagactcagtgatttttgacctcatcgagcgcgaacatcagcgccaggcaaag
ggtatcgaactcatcgcatcggagaacttcgtcagcgacgaggtgatgcaggcaatgggt
tcgtgcctgaccaataaatatgccgaaggctatcccggccaccgctattatggaggatgc
ggcgtggtcgacgaagtggagcagatagccatcgaccgtgccaaagaacttttcggagcc
gaatatgtcaatgttcagccccattcaggcgcccaggccaacatggccgtattcatggca
tgcctcaaacccggcgacaaatttctgggtctgaatctctctcacggcggccatctgtcg
cacggatctcccgtcaacttttcaggcctgatgtttcaggcccttgaatataatgtcagc
gccgaaaccggtctggtggactatgaccagatggaagaggtggcgcgccgcgaacgtccg
gccctgatcatcggcggcgcaagcgcctacagccgcgaatgggattatgcccgcatgcgc
cgtctggccgacgagatcggcgccctgctgatggtcgacatggcccaccctgcaggcctt
attgcagccggacttctcgacaatccgctgcgccacgcccatatcgtcaccaccaccacc
cacaagacactccgcggaccgcgtggcggcatgatactgcttggcaaggatttccccaat
ccctggggcaagaccactcccaaaggacaggtgcgcatgatgtcgtcgctgcttgatatg
gctgtgttcccaggcacacaaggcggcccgctcgaacatgtcatagccgccaaggctgtg
gccttcggcgaagctctgaaaccggagttcaaagcctaccagcaacaggtgctcaccaac
gcacgcgccatggccgaagccctcacacggcgcggttacaagatcgtatcaggcggcaca
gacaaccactgtgtgctggtggatctccgcacaaaattccccgacctcaccggcaaagtc
gcggagcgcgcactggtcgacgccgacatcacggccaacaagaacatggttccgtttgac
agccgctcaccgttccagacctcgggcatacgattcggcacaccggccataaccacacgc
ggcgtcaaagaggatcagatggataccattgtggaactgatcgacactgtgctctccgat
cctgaaaaccaagaagtgatcgcagcagtcagaaaccgtgtcaatgcgatgatggaaaaa
tatccgatcttcgcgtattga
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