Paramuribaculum intestinale: NF347_05575
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Entry
NF347_05575 CDS
T09294
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
pii
Paramuribaculum intestinale
Pathway
pii03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pii00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NF347_05575 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pii03019
]
NF347_05575 (recQ)
03400 DNA repair and recombination proteins [BR:
pii03400
]
NF347_05575 (recQ)
Enzymes [BR:
pii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF347_05575 (recQ)
Messenger RNA biogenesis [BR:
pii03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NF347_05575 (recQ)
DNA repair and recombination proteins [BR:
pii03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NF347_05575 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
RecQ-1-like_HTH
Helicase_C
HRDC
RecQ_Zn_bind
HTH_40
ResIII
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
WLT43007
LinkDB
All DBs
Position
complement(1249870..1252050)
Genome browser
AA seq
726 aa
AA seq
DB search
MTHPTLLAEALKHHFGFDTFKGNQEAIMQSLLDGNDTFVLMPTGGGKSLCFQLPSLLMEG
TAIVISPLIALMKNQVDAMRNFSEEDDVAHFLNSSLNRAAIDKVKADVASGKTKLLYVAP
ESLTKEENIEFLKTVKISFYAVDEAHCISEWGHDFRPEYRRIRPIINEIGKRPVIALTAT
ATLKVQHDIQKNLAMLDARVFKSSFNRENLYYEIRPKTPTVDRDIIKFIKNNEGKSGIIY
CLSRKKVEELAEMLQVNNIKALPYHAGMDGQTRSENQDAFLHEKVDVIVATIAFGMGIDK
PDVRFVIHYDMPKSLEGYYQETGRAGRDGGEGKCITFYAAKDLQKMEKFMQNKPLSEQTI
GRQLLLETAGYAESSLCRRKSLLHYFGEEYKPENCGSCDNCLNPKKKVEAKDELCAVIET
VAALKEKFKADHIVDVMRGKRTADVRNLGHDELELFGCTEKSDQKFLSAVIRQAVIAGYL
ERDIENYGLLKLTPKAKKFLNKPESFKIVEDREFNEEEEVEVLKSGAGCAADPELYSILK
DLRKKIARQNSLPPYVIFQDPSLEAMATTYPVNIEELAGIAGVGAGKARRYGKEFVEVIR
RHVEENDIDRPEDLVVRSLANKSKVKISIIHAIDRKIDLNEIADSKGMEFDELLDEIESI
VNSGTKININYYIDEMLDEDQQDEIFDWFKQSESGMLEEAYQEFGSDYSEEEIRLMRIKF
ISDMGY
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgactcatccaaccctcctcgctgaagctctcaaacatcatttcggcttcgacacattc
aaaggcaatcaggaagctataatgcagagcctgcttgacggcaatgacacttttgtgctt
atgcctacaggcggtggaaaatcattgtgttttcaattgccgtcactactcatggaagga
acggccatcgtgatatccccgctcatcgcgctgatgaaaaatcaggtcgatgccatgcgt
aatttcagcgaagaggatgatgtggctcattttctgaactcgtcgctcaatcgtgcggcc
atagacaaagtaaaagccgatgtggcttctggaaagactaagctgttgtatgtggcgccg
gaatcgttgaccaaagaggaaaatatcgagtttcttaaaaccgtaaagatatcattttat
gctgttgacgaggcacactgcatctctgaatggggtcatgacttccgtccggaatatcgt
cgtatacgacctattatcaacgagatcggcaagcgtcctgtaatagcactgacggctacg
gcgactcttaaggtgcagcatgatatacagaaaaatctggcgatgcttgacgcacgtgtg
ttcaagtcgtcgttcaatcgtgaaaacctatattacgagattcgaccaaagacgccgact
gtagaccgtgatataatcaagtttatcaagaataacgagggcaaatccggtatcatctac
tgcttgagccgtaaaaaagtggaagaactggctgaaatgctgcaggtgaacaatatcaag
gcgttgccctatcacgccggcatggacggtcagacccgttcggaaaaccaggatgcattt
ctgcatgagaaggttgatgtcatagtggctacaatagctttcggcatgggtatcgacaag
cctgatgtaaggtttgtcatacactacgatatgcccaaaagcctagagggatattatcag
gagacaggacgagctggccgtgacggaggcgaaggaaagtgtataacattctatgctgct
aaggatctgcagaagatggaaaaattcatgcagaacaagcctctgtcggagcagaccatc
ggacggcaactgctgctggaaaccgccggatatgccgagtcgagtctgtgccgtcgaaag
tcgctgttgcattatttcggcgaagaatacaagcctgaaaactgcgggagctgcgacaat
tgtctaaacccaaagaaaaaagtggaagcaaaagatgaattgtgtgctgtcatagaaacg
gtggcggcgcttaaagagaaattcaaggctgaccatatagtcgatgtcatgcggggcaaa
cgtactgctgatgtcagaaatctcggacatgacgaactggagttgtttggatgtaccgaa
aaatctgatcagaaatttctgtcggcagtgatccgacaggctgtaatagccggatatctt
gagcgtgacattgaaaactatggcttgctcaaacttactcccaaggcaaagaaatttctt
aacaagccggagtcgttcaaaattgtggaagaccgtgaatttaatgaggaggaagaggtc
gaggtgcttaagagtggcgccggatgtgctgccgaccccgaactgtattccattctaaag
gatctccgcaagaagatagcccgtcagaattcgttgcccccttacgttatattccaggat
ccttcacttgaggctatggcaaccacgtatccggtgaatatcgaggaacttgccgggata
gcgggcgtcggtgcaggaaaggctcgtcgctacggcaaggaatttgtggaggtgatccgc
cggcatgtcgaagaaaatgatatagaccgtccggaagatcttgtagtacgcagtcttgcc
aacaaaagcaaggtgaagatttcgatcattcatgcgatagaccgtaagatagatctcaat
gagatagcggattcgaagggtatggagtttgacgaactgctcgatgagatcgagtcgata
gtcaactccggcactaagataaatatcaattattatattgacgagatgctcgacgaggat
cagcaggacgagattttcgactggtttaagcagagtgagagcggtatgcttgaagaggcc
tatcaagagtttggcagcgactattcggaggaagaaatcaggctcatgcgcataaagttt
atctctgatatgggatactga
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