Paramuribaculum intestinale: NF347_05885
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Entry
NF347_05885 CDS
T09294
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pii
Paramuribaculum intestinale
Pathway
pii03420
Nucleotide excision repair
pii03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pii00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NF347_05885
03430 Mismatch repair
NF347_05885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pii03400
]
NF347_05885
Enzymes [BR:
pii01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NF347_05885
DNA repair and recombination proteins [BR:
pii03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NF347_05885
MMR (mismatch excision repair)
Other MMR factors
NF347_05885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WLT43066
LinkDB
All DBs
Position
complement(1322297..1324633)
Genome browser
AA seq
778 aa
AA seq
DB search
MVTEDYLQQLNGQQRAAVEYVDGPSLVIAGAGSGKTRVLTYKIVHLLRCGYEPWRILALT
FTNKAAREMRERIEALVGTEVASRLWMGTFHSIFARILRANADRIGFKSSFTIYDSADSK
SLVKTIVKDLALDEKIYKPSSVISAISTAKNALISPEKYAADREIMRADADARRPRIHEI
YRIYRDRCFTAGAMDFDDLLYYTNVLLRDNPDVLRHYQEFFRYVLVDEYQDTNFAQHLIV
ARICEEHHQLCVVGDDAQSIYSFRGANIRNILSMRDTYPGMKLFKLERNYRSTQNIINAA
NSLIEKNTEQIRKEVYSENKPGDRIEVVSSYSDLDESAIVANRISQVRMLTHDSYDEFAI
LYRTNAQSRILEESLRKRNIPYRIYGGLSFYQRKEVKDAVAYFRLAVNPDDDEALRRVIN
FPARGIGETTVNKVARTAMDCGVSMMAVLHDPDGFGLEVHSGTRRKLAAFASMVDRFAAQ
VASGDDALAVASEIIRATGLLSMLITDRTPESISKQENLNELLAGVKEFTEMRREEGEAD
LGLAAFLGQISLATDQDSDDATEERVTLMTVHAAKGLEFNNVFIVGVEEDLFPSSMAQGS
QSEIEEERRLLYVAITRARSFCMMSFASNRYRNGQPAMCSPSRFLHDIDPCYLDMKAGAT
IGAPRSRRPSYSDYMAAARQVRYPARQAQVSQPTASSVHRNPVPVSASAAKGETSFATMP
GADGSRLKAGMVIEHNRFGRGTIVEVDTSQPDHRIKVVFDNSGEKLLLLKFAKFIIID
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
ttggtgacggaagattatcttcagcaactcaacggtcagcaacgtgccgccgtggagtat
gtcgacggtccgagccttgtgattgcaggtgcgggatcgggaaagacacgcgtgctgacc
tacaagatcgtacatcttctaagatgcgggtacgaaccatggcgcatactggcgcttaca
tttaccaacaaggcagcgcgtgaaatgcgcgagcgtatcgaggcactggtagggacagaa
gtggcgtcgaggctgtggatgggaacattccactcgattttcgcgcgtatattgcgcgcc
aatgccgaccggatcggattcaagagcagtttcacaatatatgattcggccgactcaaaa
tcgcttgtaaagactatcgtcaaggacctggcgcttgacgaaaagatatacaaaccatcg
tcggtcatatcggcgatctccacggctaaaaacgctcttatctccccggagaaatatgca
gccgaccgtgagattatgcgggctgatgccgatgcgcgccgtccgcgtattcatgaaatc
tacaggatataccgcgaccggtgctttacggccggagccatggatttcgatgacctgctg
tattacaccaatgtgttgctgcgcgacaatcccgacgtgctgcgtcattatcaggagttt
ttccgctacgtgctcgtcgacgagtatcaggacaccaacttcgcacagcatctgatagtg
gccagaatctgcgaagagcatcatcagctttgcgtcgtgggcgatgacgcgcagagcatc
tattccttccggggagctaatatccgcaacatcctttccatgcgcgacacctatccgggc
atgaagctgttcaagctcgaacgcaactatcgctccacacagaatataatcaatgctgcc
aattcactgatcgagaaaaacaccgagcagatacgcaaggaagtgtactccgaaaacaag
ccgggcgaccgcatagaggtggtgtcgagctatagcgatctcgatgagagcgccatcgtg
gccaaccgcatatcgcaggtgagaatgctgacgcatgattcatacgatgagtttgcgata
ctctaccgcacgaacgcacagagccgcatactggaggagtcgttgcgtaaacgcaatatc
ccttaccgcatctacggaggtctttcgttttatcagcgcaaggaggtaaaagatgcggtg
gcttatttccggcttgcggtcaatcctgacgatgacgaggcgctgcgtcgtgtgataaac
ttccctgcgcggggcatcggcgaaaccaccgtcaacaaggttgcacgcacggccatggat
tgcggggtgagcatgatggctgtattgcatgatcccgacggattcgggctggaagtgcat
tctggcacgcgccgtaaacttgcggcgttcgcatccatggtcgaccggtttgctgctcag
gtggcctcgggcgacgatgctttggccgtcgcatcggagatcatacgcgccacaggtctg
ctttcaatgcttatcaccgaccgcactccggagagtatctcaaaacaggaaaatcttaat
gaacttctcgcgggagtaaaggaatttaccgaaatgcgacgtgaggagggcgaggccgat
cttggtctggcagcattcctcggacagatatctcttgccactgatcaggactcggatgat
gctaccgaggaacgggtgactcttatgaccgttcatgccgcaaaagggttggaattcaac
aatgtgtttatcgtcggtgtggaggaggatctttttccgtcgtcgatggctcaaggttcg
cagagcgagattgaggaggaacgccgactgctgtatgtagctatcacccgcgcgcgtagt
ttctgcatgatgtcgttcgcatccaaccgctaccgaaacgggcagccggccatgtgctcg
ccgtcgcgtttcctccacgatatcgacccgtgttatctcgacatgaaagccggagcgaca
ataggcgcaccgcgttcgaggcgtccgtcctactccgattatatggctgcagcccgtcag
gtacgttatccggcgcgtcaggctcaggtctcacagccgacggcatcatctgttcatcgc
aatccggtacctgtatcagcctctgcagcaaagggcgaaacttcgtttgcaaccatgccg
ggcgctgacggatcacggctgaaggccggaatggtgatagagcacaatcgcttcggacgc
ggcaccattgttgaggtcgacacctcgcagcccgaccatcgtattaaggtggtgtttgat
aattcgggcgaaaaactgttgttgctgaaatttgcaaaattcataatcattgactga
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