Paramuribaculum intestinale: NF347_06070
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Entry
NF347_06070 CDS
T09294
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
pii
Paramuribaculum intestinale
Pathway
pii00550
Peptidoglycan biosynthesis
pii01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NF347_06070 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pii01002
]
NF347_06070 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pii01011
]
NF347_06070 (dacB)
Enzymes [BR:
pii01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
NF347_06070 (dacB)
Peptidases and inhibitors [BR:
pii01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
NF347_06070 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
pii01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
NF347_06070 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Motif
Other DBs
NCBI-ProteinID:
WLT43102
LinkDB
All DBs
Position
complement(1363441..1364934)
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AA seq
497 aa
AA seq
DB search
MIKYSTLRRSIFVVLAMAMAMAMAVSVKAAGPASPIGVSGVGESHLGIYIADIATGETLR
DINSNAAFVPASITKALTSASVLTLMNSCDRYETRVEAVGKITDDGTLKGDIVVRCVGDP
TVESAYFDEAGGFADSIAAAVVATGIKRVEGTVVIDSSLMPEEGVPDGWADEDIVWPYGT
SHHAANFRDNKFVLTLPSRKSVPYVPGLQVSHTPAKGSLKIDRKKDSNVIISRGNPRRNG
ESITVSTPDPSAVMRHEVMQKLRHNGVEMSDAPVSADGDDVASTLYIHRSPELVDILRSL
MYRSDNMMAEAMLRSVAPGQSRASAVKTELDMWETRDVDTRRVVIEDGSGLSRNDRLTPM
FLANVFTWMASHYKAPDYVSLFPKAGCDGTLKSFLRDTPLEGRVALKTGSMRGVQSYAGY
MLGGDGQPTHVIVIMVNGFTCGRTALKTGIEDMLLSMFAPDYVRPVKQVTKAPKKKGGAS
RTKSQKSRKSSKKKRRV
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatacagtacattacgtagatcgatatttgtcgtgttggccatggccatggcc
atggccatggctgtgtccgtcaaagccgccgggccggcgtcgccgatcggcgtcagcggt
gtgggcgaatcacatcttggtatatacatagccgatatagcgacaggcgaaacgttgcgt
gatataaacagcaacgctgcttttgtgccggccagcattaccaaagcactgacatcggcg
tcggtgctgactctcatgaactcctgtgaccgttatgaaacccgggttgaggcggtgggc
aagataactgatgacggcacactcaagggcgatatagtggtgcgttgtgtcggtgatcct
accgtcgagtcggcttatttcgatgaggccggaggattcgccgacagcatagccgctgcc
gttgttgcaacaggtataaaacgagtagaaggcacggtggtgattgattcgtcgttgatg
cctgaggagggcgtgcccgacggatgggctgacgaagatatcgtgtggccctacgggaca
tcgcaccatgcggcgaatttccgtgacaacaagtttgtgctgaccctcccgtcgcgaaag
tcagtgccttatgtgcccggactgcaagtgtcgcacaccccggcaaaaggatcgctcaag
attgaccgcaagaaggattccaacgtcataatatcgcgtggaaatccacggcgcaatggc
gaaagcatcaccgtctctacgccggatccttcggcggtgatgcgacatgaagtgatgcag
aaacttcgccacaatggggtggagatgtccgatgctccggtgtcggccgatggcgatgac
gttgcgtccacactctatatccaccggtcgcctgaacttgtcgatatattgcgcagtctg
atgtatcggagtgacaatatgatggctgaggccatgctgcggtcggtagcgccggggcag
tcacgcgcatcggcggtcaagacagagcttgacatgtgggaaacgcgcgatgtggatacg
cggcgtgtggtgatcgaggatggaagcggactgtcgcgcaacgaccgtctgaccccaatg
tttcttgcaaacgttttcacatggatggcatcacactacaaggctcccgactatgtcagc
ctgtttccaaaagctggctgcgacggcactctcaagagttttcttcgtgacacacctctt
gaagggcgagtggcgttgaagaccggaagcatgaggggagtgcagtcatacgccggctat
atgcttggtggcgacggacagcctacgcacgttatagtcataatggtcaacggttttact
tgcggacggacagctttgaagaccgggatagaggatatgttgctctctatgtttgcccca
gactatgtgcgtccggtcaagcaagtgaccaaagcacctaagaaaaagggtggggcgtct
cggactaaatcgcagaaatcccgcaagtcatcgaagaagaaacgacgggtatga
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